Pairwise Alignments

Query, 334 a.a., 50S ribosomal protein L3 from Methanococcus maripaludis S2

Subject, 236 a.a., 50S ribosomal protein L3 from Azospirillum sp. SherDot2

 Score = 46.2 bits (108), Expect = 8e-10
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 30/178 (16%)

Query: 152 PKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVK 211
           PK+K  +VE R+   ++ E        +G  L++S  F AG+ +D    + GKGF G++K
Sbjct: 76  PKRK--LVEFRVDADALIE--------VGAELSVSH-FVAGQFVDVTGTSIGKGFAGAMK 124

Query: 212 RWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVPLPGQMGFHQRTEYNKRILKLGSE 270
           RW        H      R  GS G  + P +V     + G +G  + T  N +++ +   
Sbjct: 125 RWNFGGLRATHGVSVSHRSHGSTGNRQDPGKVFKNKKMAGHLGDERVTVLNLQVVSVDE- 183

Query: 271 GAEITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEIAYIST 328
                             G +++KG V G     + +R +V+    + GLP  A I T
Sbjct: 184 ----------------ARGLILLKGAVPGAEGGWLRIRDAVKKKAPE-GLPFPAGIKT 224