Pairwise Alignments

Query, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

Subject, 251 a.a., Ribonuclease 3 from Xanthobacter sp. DMC5

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 4/224 (1%)

Query: 2   KNFEKLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEYL 61
           ++   L  ++  +F D +I + A  H S V  +    L   +R+E+LGD VL  ++S  L
Sbjct: 21  RDLAHLEERIGYRFRDRSILELALSHISAVKGEA-PRLRSYQRVEFLGDHVLGSVVSHML 79

Query: 62  FKK-ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIVSDVF 120
           +       EGE+S+  A+ V E A    A+ +    ++ LG GE  S  + + AI++DV 
Sbjct: 80  YLAFPEGEEGELSRRLAELVREEACAEVAEDMDLGPFIRLGPGESQSGAHKRRAILADVA 139

Query: 121 EAFIAAIYLDQGLDSVKKFVYEFIIPIIEESSKELFIDYKTKLQEFPELIN-KSINYVNL 179
           E  +AA++LD G ++    V  F  P +E   + L  D KT LQE+ +        Y  +
Sbjct: 140 EGVVAAVFLDGGYEAAHALVERFWRPRLEAPRRPL-RDAKTVLQEWAQARGLPPPVYREV 198

Query: 180 EETGEAHDKKFVIAVKSGRKILGKGIGKSKKEAEMKAAKNALLK 223
             +G  H  +F +AV     +  +  G SK+ A+  AA   L++
Sbjct: 199 MRSGPDHAPRFTVAVDLPGLVSAQADGASKQNAQKAAAAAFLVR 242