Pairwise Alignments

Query, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

Subject, 239 a.a., ribonuclease III from Agrobacterium fabrum C58

 Score = 74.7 bits (182), Expect = 1e-18
 Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 13/221 (5%)

Query: 6   KLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEYLFKK- 64
           +L + +  +F +     RA  H+S     ++    + ERLE+LGD VL L ++E LF   
Sbjct: 14  RLEALIGYEFKEKARLDRALTHAS----ARSAAAGNYERLEFLGDRVLGLCVAELLFSTF 69

Query: 65  ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIVSDVFEAFI 124
            N SEGE+S    + V   +      ++  +N++  G       G     + +DV E+ I
Sbjct: 70  RNASEGELSVRLNQLVSAESCAAIGDEMGLHNFIRTGSDVKKLTGKAMLNVRADVVESLI 129

Query: 125 AAIYLDQGLDSVKKFVYEF---IIPIIEESSKELFIDYKTKLQEFPELINKSINYVNLEE 181
           A +YLD GL++ +KF+ ++       ++   +    D KT+LQE+      +     +++
Sbjct: 130 ATLYLDGGLEASRKFILKYWQGRATSVDAGRR----DAKTELQEWAHARFAATPAYRVDD 185

Query: 182 -TGEAHDKKFVIAVKSGRKILGKGIGKSKKEAEMKAAKNAL 221
            +G  HD  F + V+        G+ +SK+ AE  AA   L
Sbjct: 186 RSGPDHDPSFTVTVEIPGVKPETGVERSKRAAEQVAATRLL 226