Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 448 a.a., peptidase PmbA from Pseudomonas simiae WCS417

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 77/417 (18%), Positives = 170/417 (40%), Gaps = 35/417 (8%)

Query: 5   LQYLIDRIMEISEKKGFET-EVFISKGKNFSSELDGENLDSIEESDDFGIGVRVIKDKKV 63
           LQ  +++I+  ++++G    EV +S  +  S+ +    ++++E + D G G+ +   ++ 
Sbjct: 15  LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYMGQRK 74

Query: 64  GFAYSSKNDIDVVNKAMENLIYDSDTSFSNPEKYTHPKGMLYDDVKK--------LTEKE 115
           G A +S +  D + + +   +  +  +  +       K ++  D++         +T ++
Sbjct: 75  GSASTSASGPDAIRETVAAALAIAKHTSEDESSGLADKALMAKDLQDFDLFHAWDITPEQ 134

Query: 116 LIDA--LFEMKDILKENKITTVSGGVSNSYDYSRII-NSNGVDVEEENTYYSASIAGIN- 171
            I+   + E      + +I    G   +++   R+  NS+G      +T +S S   I  
Sbjct: 135 AIEKALICEAAAFDADPRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCVMIAE 194

Query: 172 -NGETAYDYLTKNNIFDVKELAENVVEFLKNPNAIKTEFEGNI-----------MLDQRA 219
            +G+   DY      +DV    E + + +             +           +L    
Sbjct: 195 ADGQMQRDYW-----YDVNRQGELLADAVSIGQRAAQRAASRLGARPVPTCEVPVLFSAE 249

Query: 220 LNSLLSYTLIPAFNAENVQRNRSVLKDKLECDVFGENITIEDDGTRDYSLYSAVVDGEGT 279
           L   L  + + A +  N+ R  S L+  +   +F E +TI++      ++ S   DG+G 
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGSIGQKLFPEWLTIDERPHLMRAMGSTSFDGDGL 309

Query: 280 KTQKTTLIENGVLKNYLYDIKRANIEGKKSTGNASRGYSSLPSVGPTNIVIEPVEKQENI 339
            T     +E G L +Y+         G  ST N+   ++   + G      +       +
Sbjct: 310 ATYAKPFVEKGELVSYVLGTYAGRKLGLPSTANSGGVHNLFVTHGDE----DQAALLRRM 365

Query: 340 DEYLYINTLIGTHTANPITGDFSVEISNSYIMKKGEKTPVKKGLLSGNIFEILKTAV 396
              L +  L+G H  N +TGD+S   +  ++     +  V++  ++GN+ ++ K  V
Sbjct: 366 GRGLLVTELMG-HGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIV 421