Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 480 a.a., protease TldD from Pseudomonas simiae WCS417

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 97/372 (26%), Positives = 149/372 (40%), Gaps = 42/372 (11%)

Query: 50  DFGIGVRVIKDKKVGFAYSSKNDIDV----------VNKAMEN------------LIYDS 87
           D G+GVR    +K GFAYS+   ++           +++A +N             +Y  
Sbjct: 65  DQGVGVRAQSGEKTGFAYSNAITLEALGLAARAARSISRAGQNGTVQAFSTQDVAQLYAP 124

Query: 88  DTSF---SNPEKYTHPKGMLYDDVKKLTEKELIDALFEMKDILKENKITTVSGGVSNSYD 144
           D      S  EK    K +  D   +  +  +      M  + +   + +  GG++   D
Sbjct: 125 DNPLEVISRAEKVELLKRI--DAATRALDPRIQQVTVSMAGVWERILVASTDGGLAA--D 180

Query: 145 YSRIINSNGVDVEEENTYYSASIAGINNGETAYDY-LTKNNIFDVKELAENVVEFLKNPN 203
              ++  N   + E+N        G   G T Y Y LT +         E + + L N  
Sbjct: 181 VRPLVRFNVSVIVEQNGRRERGGHG-GGGRTDYRYFLTDDRAMGYAR--EALRQALVNLE 237

Query: 204 AIKTEFEG-NIMLDQRALNSLLSYTLIPAFNAENVQRNRSVLKDKLECDVFGENITIEDD 262
           AI        ++L       LL   +      +  ++  S    ++   V  +  TI DD
Sbjct: 238 AIPAPAGTLPVVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDD 297

Query: 263 GTRDYSLYSAVVDGEGTKTQKTTLIENGVLKNYLYDIKRANIEGKKSTGNASR-GYSSLP 321
           GT      S  VD EGT T+ TTLIENGVLK Y+ D   A + G   TGN  R  Y+ LP
Sbjct: 298 GTLAGRRGSLSVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLP 357

Query: 322 SVGPTNIVI-----EPVEKQENIDEYLYINTLIGTHTANPITGDFSVEISNSYIMKKGEK 376
               TN  +     +P E   ++   +Y   L G    +  +G F    S +Y+++ G+ 
Sbjct: 358 MPRMTNTYMLGGESDPAEIIASVKRGIYCANL-GGGQVDITSGKFVFSTSEAYLIEDGKI 416

Query: 377 T-PVKKGLLSGN 387
           T PVK   L GN
Sbjct: 417 TAPVKGATLIGN 428