Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 486 a.a., TldD protein, part of TldE/TldD proteolytic complex from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 71.2 bits (173), Expect = 6e-17
 Identities = 88/372 (23%), Positives = 143/372 (38%), Gaps = 37/372 (9%)

Query: 48  SDDFGIGVRVIKDKKVGFAYSSKND----IDVVNKAMENLIYDSDTSFSNPEKYTHPKGM 103
           S D G+GVR +  +K  FAYS        ID  +                P         
Sbjct: 69  SIDQGVGVRAVSGEKTAFAYSDDLSWDSLIDAAHTVRSISAQGQGRKVRVPAAKVSKSRS 128

Query: 104 LY---------DDVKKLTEKELIDALFEMKDILKENKITTVSGGVSNSYDYSRIINSNGV 154
           LY         D   K+   E ++ + + KD     ++  V  G+++ YD   +  ++G 
Sbjct: 129 LYPGLDPIATLDSTAKVALLEKVERMAKAKD----PRVKQVMAGLASEYDVVLVARADGT 184

Query: 155 DVEEENTYYSASI-----------AGINNGETAYDYLTKNNIFDVKELAENVVEFLKNPN 203
              +       S+           AG + G   +     ++      + E V   L N +
Sbjct: 185 LAADVRPLIRLSVTVIAEQSGRREAGSSGGGGRFGLAYFDDAMVQSYVDEAVSYALTNLD 244

Query: 204 AIKTEF-EGNIMLDQRALNSLLSYTLIPAFNAENVQRNRSVLKDKLECDVFGENITIEDD 262
           A      E  ++L       LL   +      +  ++  S    ++   V  + +T+ DD
Sbjct: 245 ARPAPAGEMVVVLGSGWPGILLHEAVGHGLEGDFNRKGSSAFAGRIGQRVAAKGVTVLDD 304

Query: 263 GTRDYSLYSAVVDGEGTKTQKTTLIENGVLKNYLYDIKRANIEGKKSTGNASR-GYSSLP 321
           GT      S  VD EG  +Q+  LIE+G+L+ Y+ D   A + G K TGN  R  Y+ +P
Sbjct: 305 GTIADRRGSLNVDDEGHTSQRNVLIEDGILRGYIQDAMNARLMGVKPTGNGRRESYAHVP 364

Query: 322 SVGPTNIVI-----EPVEKQENIDEYLYINTLIGTHTANPITGDFSVEISNSYIMKKGE- 375
               TN  +      P E   +I + LY  T  G    +  +G F    S +Y ++ G+ 
Sbjct: 365 MPRMTNTYMLGGDKAPEEIVASIKKGLYA-TNFGGGQVDITSGKFVFSASQAYWVENGQI 423

Query: 376 KTPVKKGLLSGN 387
           + PVK   L GN
Sbjct: 424 QYPVKGATLVGN 435