Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

Subject, 323 a.a., Protein-export membrane protein SecF (TC 3.A.5.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 64/277 (23%), Positives = 130/277 (46%), Gaps = 23/277 (8%)

Query: 14  ILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQLPDS---EVKISESSIG 70
           +L + ++ ++ V G    +D +GGT I I      ++ V++E L  +   E ++      
Sbjct: 32  LLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEMDVMREALQKAGYEEPQLQNFGSS 91

Query: 71  TFVVIK-------SGLETDVDSVRAVVKEFFNVED-LSELSYTEKQIGSVLSSKFWEEGM 122
             ++++       +G +     V  ++ E  N    +  + +    +G+ L+    + G 
Sbjct: 92  HDIMVRMPPTEGETGGQVLGSKVVTIINEATNQNAAVKRIEFVGPSVGADLA----QTGA 147

Query: 123 KAVGFAFIFMAIVVYAIFRTPVPSGAVILAAASDMAIAVGGMSLFNIPISTATIAALLML 182
            A+  A I + + V   F   + +G V++A A D+ I +G +SLF+I I    +A+L+ +
Sbjct: 148 MALLVALISILVYVGFRFEWRLAAG-VVIALAHDVIITLGILSLFHIEIDLTIVASLMSV 206

Query: 183 VGYSVDTDIMLTTRV----LKRRSGTLDERIAGAMKTGITMSLTTIFAMAVLYLVVTFVV 238
           +GYS++  I+++ R+     K R GT  E    ++    T+  T I +   L +++   +
Sbjct: 207 IGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQ--TLHRTLITSGTTLVVILMLYL 264

Query: 239 PAADVLANIAAVLLIGL-IGDLMLTWMTNAGILKYYM 274
               VL   +  +LIG+ IG     ++ +A  LK  M
Sbjct: 265 FGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGM 301