Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

Subject, 312 a.a., protein-export membrane protein, SecD/SecF family from Kangiella aquimarina DSM 16071

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 63/270 (23%), Positives = 126/270 (46%), Gaps = 22/270 (8%)

Query: 4   NYKVLTIIPIILALLSLTLVS------VNGLKESIDVSGGTEISILAPANTDLSVLKEQL 57
           NY  L I     AL ++ +++        GL   +D +GGT + +    + DL  +++QL
Sbjct: 9   NYDFLKIRKFAFALSAILIIASIVSFFTKGLNYGLDFTGGTLVEVGYEQDADLPNIRQQL 68

Query: 58  PDSEVKISESSIGTF-----VVIKSGLETDVDSVRA--VVKEFFNVEDLSELSYTEKQIG 110
            D  +KI+ + +  F     V I+   +  +++ +   VV      +    +   +  +G
Sbjct: 69  DD--IKINGAVVQNFGSAKVVQIRMPQQDHIENAKVSDVVLAALASDGSKVIKRDQSFVG 126

Query: 111 SVLSSKFWEEGMKAVGFAFIFMAIVVYAIFRTPVPSGAVILAAASDMAIAVGGMSLFNIP 170
            V+  +  E+G  A+  A I + I V   F      G+V  A A D+ I VG  S+ ++ 
Sbjct: 127 PVVGEELKEQGGLAMIVALICIMIYVALRFEWKFSVGSVA-ALAHDVIIVVGFFSITSVE 185

Query: 171 ISTATIAALLMLVGYSVDTDIMLTTRV----LKRRSGTLDERIAGAMKTGITMSLTTIFA 226
                +AALL ++GYS++  I++  R+    L  R  T +E I  ++   +T+S T + +
Sbjct: 186 FDLTVLAALLAVIGYSLNDTIVVFDRIRENFLLMRKATPEEVINNSI--NLTLSRTVMTS 243

Query: 227 MAVLYLVVTFVVPAADVLANIAAVLLIGLI 256
           +  + +++         + + A  L++G++
Sbjct: 244 LTTMLVLLALFFFGGQTIHSFAEALIVGVL 273