Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

Subject, 989 a.a., protein-export membrane protein, SecD/SecF family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 61.6 bits (148), Expect = 7e-14
 Identities = 62/289 (21%), Positives = 125/289 (43%), Gaps = 33/289 (11%)

Query: 1   MNINY----KVLTIIPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQ 56
           +NI++    KV  +I   + ++ L    +NGLK  +D +GG    +        S LK  
Sbjct: 668 LNIDFLGKRKVAYLISTGIIIIGLAFAVINGLKFGVDFTGGRSYIVEFAEPVAASDLKTG 727

Query: 57  LPDS-EVKISESSIGTFVVIK---------------SGLETDVDSVRAVVKEFFNVEDLS 100
           L  + +  +   + G+  VIK               S + T V    A V  F  V++++
Sbjct: 728 LDKAFDGSVEAKTYGSNNVIKITTSYLINDDSDEANSEVATKVREGIADVTGFSFVDEVA 787

Query: 101 ELSYTE------KQIGSVLSSKFWEEGMKAVGFAFIFMAIVVYAIFRTPVPSGAVILAAA 154
           ++  +        ++G+ ++       M+A+ FA + + + +   FR    S A I+A A
Sbjct: 788 QMGDSSFAITGSSKVGATVADDIKNSSMEAMFFALVAIFLYILLRFRKWQYSLASIIALA 847

Query: 155 SDMAIAVGGMSLFN-----IPISTATIAALLMLVGYSVDTDIMLTTRVLKRRSGTLDERI 209
            D    V   ++ +       I    IAA+L ++GYS++  +++  R+ +  +     ++
Sbjct: 848 HDTLFVVAAFAIASAFGATFEIDQVFIAAMLTVIGYSINDTVIVFDRIRENITNRGTSKL 907

Query: 210 AGAMKTGI--TMSLTTIFAMAVLYLVVTFVVPAADVLANIAAVLLIGLI 256
                  I  TM+ T I +   L +V+  ++   +VL   +  L +G++
Sbjct: 908 VKMFNDAINQTMARTLITSFTTLIVVIVLLIFGGEVLRGFSFALFVGVL 956