Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 320 a.a., protein translocase subunit SecF from Rhodanobacter sp000427505 FW510-R12

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 32/152 (21%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 227 VSPTLGSEFIKGSVIAGIFAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILGFASLID 286
           VS  +G E      +A +F  + +   +  R++  +  +  +IT   + L+ LG  +L+ 
Sbjct: 134 VSAQVGQELRSDGTVAAVFVILGIMFYLWIRFER-RFAIAAVITEVHDTLVTLGILALVQ 192

Query: 287 WKLDLASIAGIIAAVGTGVDHQIVITDET-----ISGEAKK---VTKSIKRAFFIIFGAA 338
            + D+  +A ++A +G  ++ ++V+ D       ++ +A+    + +SI          +
Sbjct: 193 REFDMTVLASVLAVIGYSINDKVVVFDRIRELFRLARKAEPEEILNRSINNTLSRTIITS 252

Query: 339 ATTIAAMLPLFVMGIGMLKGFAITTIAGVLMG 370
             T   M  L+  G   + GFA+T + G+++G
Sbjct: 253 LFTGITMGALYFFGGTAVHGFAVTMLIGIVVG 284



 Score = 35.0 bits (79), Expect = 3e-06
 Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)

Query: 4   LKDHKVVILLVCVLASLLLIAFKGISFGVDLSGGSTIVLQTESELSESEMTTV------- 56
           ++ + + I +  ++AS+ LI F+G+++G+D +GG ++++     +  SE+          
Sbjct: 15  MRKYTIAIGIFLMVASIGLIMFRGLNYGLDFTGGVSMIVDYGQSVEISEVRNALEKGGID 74

Query: 57  NEILTSRLNTNGLSDVRIYPRGSDEIVIEIPESADLERI 95
           N ++ S   T  +S +R+ P+  D   ++     +L+RI
Sbjct: 75  NAMVQSMGGTREVS-IRLQPK-DDPGAVDANGKFNLDRI 111