Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 319 a.a., protein translocase subunit SecF from Magnetospirillum magneticum AMB-1

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 224 ISSVSPTLGSEFIKGSVIAGIFAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILGFAS 283
           +  V P +G E ++  V+A + A  A+A  + FR++  +  +  L++ F +V+   G  S
Sbjct: 127 VEIVGPKVGGELVRDGVLAVVLALGAIALYVWFRFE-WQFGVGALVSTFHDVITTFGLFS 185

Query: 284 LIDWKLDLASIAGIIAAVGTGVDHQIVITDETISGEAKKVTKSIKRAFFIIFG------- 336
           +   + +L ++A I+   G  V+  +V  D       K  T S+     +          
Sbjct: 186 ITGLEFNLTTVAAILTIAGYSVNDTVVEYDRVRENLRKFKTMSLYDLLNLAVNETLARTI 245

Query: 337 -AAATTIAAMLPLFVMGIGMLKGFAITTIAGVLMG 370
              +T    +L L  +G  +L+GF+I  + G+++G
Sbjct: 246 LTVSTVFVTVLALLFVGGEVLRGFSIAMLWGLIIG 280



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 11  ILLVCVLASLLLIAFKGISFGVDLSGGSTIVLQTESELSESEMTTVNEILTSRLNTNGLS 70
           I  V ++ S   IA KG +FG+D +GG  I+L+ +S    +++      + + L   GL 
Sbjct: 26  ITAVLIIGSFASIAIKGFNFGIDFAGG--ILLEAQSTTGPADL----HGMRTTLGHLGLG 79

Query: 71  DVRIYPRGSD--EIVIEIPESADLERIQ 96
           +V +   G+   +++I +      E+ Q
Sbjct: 80  EVSLQEFGTTGRDVMIRVQRQEGDEKTQ 107