Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 604 a.a., Protein translocase subunit SecD from Escherichia coli ECRC62

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 99/399 (24%), Positives = 174/399 (43%), Gaps = 74/399 (18%)

Query: 42  LQTESELSESEMTTVNE---ILTSRLNTNGLSDVRIYPRGSDEIVIEIPESADLERIQKI 98
           + +++ LSE+    V +   IL +R+N  G+++  +  +G+D IV+E+P   D  R ++I
Sbjct: 202 VMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEI 261

Query: 99  L--TQQGVFTAVIDN--QTAYTGQDVSYVEEPGMTASGYGVGF--KLTLDGA-------- 144
           L  T    F  V  N  Q A     V    E   T  G  V    ++ L G         
Sbjct: 262 LGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSS 321

Query: 145 -----QKFADVAYGKGGYPVELYMDEKAISAPLLS-------ADLADGN-----IHQNQV 187
                Q   +++    G  +     +  I  P+ +       +   D N     + Q +V
Sbjct: 322 QDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV 381

Query: 188 ITVAG--------------SNPTEEDIDEAWVIYTALKSGSLPVKVHIEYISSVSPTLGS 233
           I +A               +NP     +EA  +   L++G+L   + I    ++ PTLG 
Sbjct: 382 INIANIQSRLGNSFRITGINNP-----NEARQLSLLLRAGALIAPIQIVEERTIGPTLGM 436

Query: 234 EFIKGSV---IAGIFAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILGFASLIDWK-L 289
           + I+  +   +AG+   +++  +I F  K   I    LI   + ++LI+G  SL+    L
Sbjct: 437 QNIEQGLEACLAGLL--VSILFMIIFYKKFGLIATSALI---ANLILIVGIMSLLPGATL 491

Query: 290 DLASIAGIIAAVGTGVDHQIVITD----ETISGEA--KKVTKSIKRAFFIIFGAAATTIA 343
            +  IAGI+  +   VD  ++I +    E  +G    + + +  + AF  IF A  TT+ 
Sbjct: 492 SMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLI 551

Query: 344 AMLPLFVMGIGMLKGFAITTIAGVLMGISISRPAFSRII 382
            ++ L+ +G G +KGFAITT      GI ++   F+ I+
Sbjct: 552 KVIILYAVGTGAIKGFAITT------GIGVATSMFTAIV 584