Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 323 a.a., protein translocase subunit SecF from Dickeya dianthicola ME23

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 38/163 (23%), Positives = 87/163 (53%), Gaps = 11/163 (6%)

Query: 221 IEYISSVSPTLGSEFIKGSVIAGIFAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILG 280
           ++ I  V P++G++  +   +A + A I +   + FR++  ++   ++I    +V++ +G
Sbjct: 128 VKRIEFVGPSVGADLAQTGAMALMAALICILVYVGFRFEW-RLAAGVVIALAHDVIITMG 186

Query: 281 FASLIDWKLDLASIAGIIAAVGTGVDHQIVITDETISGEAKKVTK---------SIKRAF 331
             SL   ++DL ++A +++ +G  ++  IV++D  I    +K+ +         S+ +  
Sbjct: 187 VLSLFSIEIDLTTVASLMSVIGYSLNDSIVVSDR-IRENFRKIRRGTPYEIFNVSLTQTL 245

Query: 332 FIIFGAAATTIAAMLPLFVMGIGMLKGFAITTIAGVLMGISIS 374
                 + TT+  +L L++ G  ML+GF++T + GV +G + S
Sbjct: 246 HRTLITSGTTLVVILMLYLFGGAMLQGFSLTMLIGVTIGTASS 288



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 16  VLASLLLIAFKGISFGVDLSGGSTIVLQTESELSESEMTTVNEILTSRLNTNGLSDVRIY 75
           +L S++++  +G ++G+D +GG+ I +  E      +M          L   G +D  + 
Sbjct: 34  LLLSIVVMGVRGFNWGLDFTGGTVIEISLEKPADLEQM-------RGALEKAGFADPLVQ 86

Query: 76  PRGSD-EIVIEIPESAD 91
             GS  +I++ +P + D
Sbjct: 87  NFGSSRDIMVRMPPAHD 103