Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 615 a.a., protein translocase subunit SecD from Dickeya dianthicola ME23

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 94/404 (23%), Positives = 166/404 (41%), Gaps = 69/404 (17%)

Query: 35  SGGSTI-VLQTESELSESEMTTVNE---ILTSRLNTNGLSDVRIYPRGSDEIVIEIPESA 90
           SG  T+  + +++ L E+    V +   IL +R+N  G+++  +  +G+D IV+E+P   
Sbjct: 205 SGSDTLRAVMSDARLGEAREYAVQQNINILRNRVNQLGVAEPLVQRQGADRIVVELPGIQ 264

Query: 91  DLERIQKILTQQGVF-----TAVIDNQTAYTGQDVSYVEEPGMTASGYGVGFKLTLDGAQ 145
           D  R ++IL            + +D      G+     E   M   G    +K  +    
Sbjct: 265 DTARAKEILGATATLEFRLVNSNVDPVALTNGRVPGDTEVMNMRDGGPVALYKRVILTGD 324

Query: 146 KFADVAYGKGGY---PVELYMDEKA-----------ISAPLLSADL---------ADGNI 182
              D   G   Y    V + +D              I  P+ +  +         A+G  
Sbjct: 325 HITDSTSGNDEYNRPQVNISLDSAGGNMMSNFTKDNIGKPMATLFVEYKDSGKKDANGRA 384

Query: 183 ---HQNQVITVAG--------------SNPTEEDIDEAWVIYTALKSGSLPVKVHIEYIS 225
               Q +VI VA               +NP     +EA  +   L++G+L   + I    
Sbjct: 385 VLEKQEEVINVATIQSRLGNSFRITGINNP-----NEARQLSLLLRAGALIAPIQIVEER 439

Query: 226 SVSPTLGSEFIKGSVIAGIFAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILGFASLI 285
           ++ PTLG + I   + A +         + F YK   ++    +     ++L++G  SL+
Sbjct: 440 TIGPTLGMQNITQGLEACLAGLAVSILFMIFFYKKFGMIATSAL--LLNLVLVVGIMSLL 497

Query: 286 DWK-LDLASIAGIIAAVGTGVDHQIVITD----ETISGEA--KKVTKSIKRAFFIIFGAA 338
               L +  IAGI+  +   VD  ++I +    E  +G    + + +  + AF  IF A 
Sbjct: 498 PGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDAN 557

Query: 339 ATTIAAMLPLFVMGIGMLKGFAITTIAGVLMGISISRPAFSRII 382
            TT+  +L L+ +G G +KGFAITT      GI ++   F+ I+
Sbjct: 558 VTTLIKVLILYAIGTGSIKGFAITT------GIGVATSMFTAIV 595