Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 633 a.a., Protein translocase subunit SecD from Acinetobacter radioresistens SK82

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 98/414 (23%), Positives = 160/414 (38%), Gaps = 80/414 (19%)

Query: 44  TESELSESEMTTVNEILTS---RLNTNGLSDVRIYPRGSDEIVIEIPESADLERIQKIL- 99
           T++   E +   VN+ LT+   R+N  G+++  +  +GS+ IV+++P   D    +++L 
Sbjct: 216 TDARRQEIQSYAVNQNLTTLRNRINELGVAEALVQTQGSNRIVVDLPGVQDTAEAKRVLG 275

Query: 100 -TQQGVFTAVIDNQTAY----TGQDVSYVEEPGMTASGY--------------------- 133
            T    F  V D    Y    TG+       PG     Y                     
Sbjct: 276 RTANLEFRLVSDLNDQYIDPYTGKSNGQPLPPGTELFAYESLDSGRQLLLQRNRILTGER 335

Query: 134 -------------GVGFKLTLD--GAQKFADVAYGKGGYPVE-LYMDEKA----ISAPLL 173
                        G    +TLD  G +  AD      G  +  L+++ K     ++ P+ 
Sbjct: 336 VQNASSGFSQDTGGAEVNITLDSAGGKLMADATRNAVGKRMAVLFIENKQRISYVTDPVT 395

Query: 174 SADLADGNIHQNQVI-------TVAGSNPTEEDID---EAWVIYTALKSGSLPVKVHIEY 223
                    +   V+        V GS      +D   EA  +   L++G+L   ++   
Sbjct: 396 GTQTEVRTPYAESVVINAATIQAVLGSQFRITGLDSPQEASELALMLRAGALAAPMYFVE 455

Query: 224 ISSVSPTLGSEFIKGSVIAGIFAFIAVAA--VISFRYKNPKIVLPILITGFSEVLLILGF 281
              V P+LG E I   V++    F+ VA   V+ FR          LI  F+ V  +   
Sbjct: 456 ERVVGPSLGQENIDKGVLSTQIGFLLVAIWMVVFFRLFG-------LIANFALVFNLAMT 508

Query: 282 ASLIDW---KLDLASIAGIIAAVGTGVDHQIVITDETISGEAK-------KVTKSIKRAF 331
            S++ W    L L  IAGI+  +G  VD  ++I  E I  E K        +     RA+
Sbjct: 509 LSIMSWIGAALTLPGIAGIVITIGMAVDANVLIC-ERIREEMKWGASPKQAIVAGYDRAY 567

Query: 332 FIIFGAAATTIAAMLPLFVMGIGMLKGFAITTIAGVLMGISISRPAFSRIIQYV 385
             IF +  TT      LF +G G +KGFA+T + G+   +  +      I+Q +
Sbjct: 568 NTIFDSNLTTFLVAFILFAIGTGPIKGFAVTLMIGIACSMFTAITVTRAIVQII 621



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 23  IAFKGISFGVDLSGGSTIVLQTESELSESE-MTTVNEILTSRLNTNGLSDVRIYPRGSDE 81
           I  K +  G+DL GG   +L+ + + + S+ M T    L  +L  N L         +++
Sbjct: 115 IGAKPMKLGLDLRGGVHFLLEVDMDKALSQRMETSATDLRRQLRENNLK-FNSLTLNNNQ 173

Query: 82  IVIEIPESADLERIQKILTQQG 103
           I ++  ++ D E +   L + G
Sbjct: 174 INLQFAQNDDREAVMDFLRRNG 195