Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 272 a.a., sulfate ABC transporter permease from Pseudomonas simiae WCS417

 Score =  121 bits (303), Expect = 2e-32
 Identities = 73/256 (28%), Positives = 138/256 (53%), Gaps = 10/256 (3%)

Query: 6   GFNLLFLVISLFLLLFVLLPLLNMILNPGNVA-----GAFNDSEVIKSLLVSIKAAGTAT 60
           GF L      ++L L VL+PL  M ++   +         +   V+ +L +S   A  A 
Sbjct: 11  GFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIISAPRVLAALQLSFSTALYAA 70

Query: 61  VLAIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTS-IGRGIED 119
           ++   +G  L+++L RY F G+ +++A+ID+P A+P +V GI + A +     +G+   D
Sbjct: 71  LINGVIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPNGLVGQFAAD 130

Query: 120 IGFEIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTLGASKIKTFFNISLP 179
           +GF+I     GI + + +V LP++V + +     +  E+E  +  LGA  ++ F +I +P
Sbjct: 131 LGFKIAYTPLGITLALTFVTLPFVVRTVQPVLADIPREVEEAAACLGAKPLQVFRHILVP 190

Query: 180 LIKNNLVSGSILTFARGISEVGAILIVA-YFPKTT---PVLILDRFNEYGLSSSKPISVI 235
            +    ++G  L FARG+ E G+++ +A   P  T   P+LI+ + ++Y    +  I V+
Sbjct: 191 ALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYRGATSIGVL 250

Query: 236 MIVLSIILFSVFRLVR 251
           M+V+S +L  +  L++
Sbjct: 251 MLVVSFVLLLLINLLQ 266