Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 13/197 (6%)

Query: 56  AGTATVLAIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGI-MILAFFYGTSIG 114
           A ++++L  FLG+  SY++ R  F G+ +++ +I +P AIP + +G+  +LAF     + 
Sbjct: 345 AMSSSILVAFLGVAYSYIVYRGKFFGRKLMDLVITLPFAIPGTFMGLGYLLAFNNYPLLL 404

Query: 115 RGIEDIGFEIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTLGASKIKTFF 174
            G   I          I++  +   LP+   +G      VEE +E  S  LGAS++KTF+
Sbjct: 405 TGTSSI----------IILNCMVRKLPFSFKTGNSVLSQVEESVEEASLNLGASRLKTFY 454

Query: 175 NISLPLIKNNLVSGSILTFARGISEVGAIL-IVAYFPKTTPVLILDRFNEYGLSSSKPIS 233
           N+ LPL+K  ++   I TF   I  +G+I+ ++    K    ++ +      L      S
Sbjct: 455 NVVLPLLKPAIIFSMIYTFIATIKSLGSIIFLMTANTKVLSAMVFESTINRQLGVGACYS 514

Query: 234 VIMIVLSII-LFSVFRL 249
           + M++LSII +  + RL
Sbjct: 515 MFMVILSIIGILGILRL 531



 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 18/256 (7%)

Query: 12  LVISLFLLLFVLLPLLNMILNPGNVAGAF---------NDSEVIKSLLVSIKAAGTATVL 62
           ++ ++FLL+F++ P+  + L     +  F         +DS     L  SI  A  +T++
Sbjct: 17  ILANVFLLIFIIYPVFTVFLQSFYGSNGFTLDAYSKFISDSYYFGILKNSIVVACFSTII 76

Query: 63  AIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTSIGRGIEDIGF 122
           +IFLG   S ++ +  F  KN  +  + +P+  P   I  +   F +G         +G 
Sbjct: 77  SIFLGFLFSIIIFKTDFKFKNFFKIAVFLPIITP-GFISSLAYVFLFGRHGAVTYGLLGL 135

Query: 123 EIVDNFWGIVVVML---YVGLPYMVNSGRDGFLMVEEELENVSRTLGASKIKTFFNISLP 179
           E     W  VV+M    Y    + + S     L +  E E+ +R LG+++ + F  ++ P
Sbjct: 136 EPNIYGWKSVVIMQSIDYTTTAFFIISAV--LLGISGEFEDAARNLGSNEFQVFKKVTFP 193

Query: 180 LIKNNLVSGSILTFARGISEVGAILIV-AYFPKTTPVLILDRFNEYGLSSSKPISVIMIV 238
           L+   ++S  +L F + +++ G  +IV   F         +    Y    +  +SVI++ 
Sbjct: 194 LLIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLATASYFEIIGRYNTQMASTLSVILLF 253

Query: 239 LSIILFSVFRLVRYNK 254
            S+ LF ++   +Y+K
Sbjct: 254 PSMALFYLYS--KYHK 267