Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 284 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 85.9 bits (211), Expect = 8e-22
 Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 22/267 (8%)

Query: 1   LKADKGFNLLFLVISL--FLLLFVLLPLLNMILNPGNVAGA----------FNDSEVIKS 48
           L  D+   LL L++    +LL+F   PLL+ ++                  F  + +I+ 
Sbjct: 4   LLRDRRAQLLLLLLPGVGYLLVFFGGPLLSALIGSFRQEDGSFTLMFYQRIFTRASMIRG 63

Query: 49  LLVSIKAAGTATVLAIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFF 108
           L  SI       ++++   +PL+ LL R  F G+ +   +  +PMA+P  ++G+M++  F
Sbjct: 64  LTTSIYYGVMPVIVSLAASVPLA-LLIRRSFLGRKLFSGLYKLPMAVPGIIVGLMVIVVF 122

Query: 109 Y-GTSIGRGIEDIGFEI---VDNFWGIVVVMLYVG--LPYMVNSGRDGFLMVEEELENVS 162
             G  + R +  +G E+   V + WGI V++  V   +P+M       F  + E++    
Sbjct: 123 ERGGFLDRLVAPLGLELPKLVRDGWGIGVILASVWKQIPFMTLIITSAFAAIPEDIRYAL 182

Query: 163 RTLGASKIKTFFNISLPLIKNNLVSGSILTFARGISEVGAILIVAYFPKTTP--VLILDR 220
           RTLGAS++KTFF + +PL    + +  +LTF   +    AI  +   P   P  VL++  
Sbjct: 183 RTLGASRLKTFFFVEVPLAMPGITAAILLTFIGSMGSY-AIPDIVGPPTARPLSVLMIQE 241

Query: 221 FNEYGLSSSKPISVIMIVLSIILFSVF 247
           FN+   +    + +I+ + ++ +  ++
Sbjct: 242 FNQGRFNQVYAMGMILSLFAVTVLILY 268