Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 277 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  123 bits (309), Expect = 4e-33
 Identities = 72/251 (28%), Positives = 132/251 (52%), Gaps = 10/251 (3%)

Query: 6   GFNLLFLVISLFLLLFVLLPLLNMI-----LNPGNVAGAFNDSEVIKSLLVSIKAAGTAT 60
           G  L   V   ++ + VLLPL  ++     L P       +    + S  V++  A  AT
Sbjct: 12  GLKLSLGVTLTYVAIIVLLPLSALVFKAASLGPAEYWSIISSPRAVASYRVTVLCALAAT 71

Query: 61  VLAIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTS-IGRGIED 119
           +  +  G+ L+++L RY F G  +V+AI+D+P A+P +V GI +   F G    G  +  
Sbjct: 72  LFNVVFGVALAWVLTRYRFPGWRIVDAIVDLPFALPTAVAGIALTTLFAGNGWFGSLLAP 131

Query: 120 IGFEIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTLGASKIKTFFNISLP 179
           +G ++     GI+V M +  LP++V + +     ++  LE  +++LG S ++ F  I LP
Sbjct: 132 LGIKVAYTPVGIMVAMAFTSLPFIVRTVQPVLEDLDPALEEAAQSLGGSDLEVFRKIILP 191

Query: 180 LIKNNLVSGSILTFARGISEVGAILIVA----YFPKTTPVLILDRFNEYGLSSSKPISVI 235
           L+   L++G  L+FAR + E GAI+ +A    +  + T +LI  R  EY   ++  I+ +
Sbjct: 192 LLTPALLAGLSLSFARSLGEFGAIIFIAGNQPFSTEITALLIFIRLEEYDYQAAAAIASV 251

Query: 236 MIVLSIILFSV 246
           +++ + ++ +V
Sbjct: 252 LLITAFVMLAV 262