Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 290 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 89.7 bits (221), Expect = 6e-23
 Identities = 61/246 (24%), Positives = 129/246 (52%), Gaps = 16/246 (6%)

Query: 10  LFLVISLFLLLFVLLPLLNMILNPGNVAG-----AFNDSEVIKSLLVSIKAAGTATVLAI 64
           L  V  LFL  F++LPL+++              A  + + + ++ +++  A  +  L +
Sbjct: 27  LIAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWDAIVEPDALSAIRLTLLVAAISVPLNV 86

Query: 65  FLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTSI-GRGIEDIGFE 123
             G+  ++ +A++ F GK  +  +ID+P +I   + G++ +  F   S+ G  ++  G E
Sbjct: 87  VFGVAAAWAIAKFEFKGKAFLITLIDLPFSISPVISGLVYVILFSAHSVLGPWLKSYGIE 146

Query: 124 IVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEEEL---ENVSRTLGASKIKTFFNISLPL 180
           I+    GIV+  ++V  P++    R+   +++++    E  + +LGAS  +TF+ ++LP 
Sbjct: 147 ILFAVPGIVLATIFVTFPFVA---RELIPLMQDQGNGDEEAAISLGASGWQTFWYVTLPN 203

Query: 181 IKNNLVSGSILTFARGISEVGAILIVAYF----PKTTPVLILDRFNEYGLSSSKPISVIM 236
           IK  L+ G +L  AR + E GA+ +V+        T P+ +   +NEY + +S  ++ ++
Sbjct: 204 IKWGLLYGVLLCNARAMGEFGAVSVVSGHIRGETNTMPLHVEILYNEYNIGASFAVATLL 263

Query: 237 IVLSII 242
             L+++
Sbjct: 264 AGLALV 269