Pairwise Alignments

Query, 312 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 359 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  164 bits (414), Expect = 4e-45
 Identities = 95/280 (33%), Positives = 157/280 (56%), Gaps = 31/280 (11%)

Query: 2   LKLENLCKSWKEFQ-LKSVNLEIE-NNYCILLGPSGAGKSVIIQCITGILKPDSGKIYFN 59
           L L  + KS+   + L  ++L+IE   +  LLGPSG GK+ +++ + GI + DSG+I   
Sbjct: 7   LSLRGIGKSFGATRVLDGIDLDIEPGEFVCLLGPSGCGKTTLLRIVCGIERADSGQILLG 66

Query: 60  GEDITEMPPEKRNFGYVPQNYALFPNMNVYNNIAYGMKLRKYSKAEIEKKVMEISEFLHI 119
           G+DI  +PP  R FG V Q+YALFPN+    NIAYG+        E+ K+  E+ + + +
Sbjct: 67  GQDIAGLPPAARGFGVVFQSYALFPNLTAAQNIAYGLHPTGALAREMAKRSREMLDLVGL 126

Query: 120 SHILDRKPTTLSGGEQQRVAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGELV 179
           +   D+ P  LSGG+QQRVA+ARAL  +P++LLLDEP SALD  ++ S+ SE++ + + +
Sbjct: 127 AAHADKYPVQLSGGQQQRVALARALAPNPRLLLLDEPLSALDAQVRASLRSEIRALQKRL 186

Query: 180 PV--IHITHDFVEAKTLGNQIAILINGELNDFGN-QGIFKTPKNEKIANFLGY------- 229
            +  I +THD  EA ++ +++ ++ NG +   G    +++ P+   +A F+G        
Sbjct: 187 GIVTIMVTHDQEEALSMADRVVLMHNGRIEQAGTPDELYRQPRTRFVAGFVGRMNMLPAT 246

Query: 230 -------------------NIISNNEETFAVAPEEIVVKK 250
                              N+   ++ T  + PE +VVK+
Sbjct: 247 VLADGKVRVRDSELFCAPGNLSVGSQATVGIRPEHVVVKR 286