Pairwise Alignments

Query, 312 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 338 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  166 bits (419), Expect = 9e-46
 Identities = 102/299 (34%), Positives = 166/299 (55%), Gaps = 11/299 (3%)

Query: 19  VNLEIENN-YCILLGPSGAGKSVIIQCITGILKPDSGKIYFNGEDITEMPPEKRNFGYVP 77
           V+L IE   +  LLGPSG+GK+  ++ I G   P SG+I   G+D++ +PP  R    V 
Sbjct: 27  VDLTIEGGEFFTLLGPSGSGKTTCLRMIGGFTLPTSGRILIGGQDVSHLPPYARPVNTVF 86

Query: 78  QNYALFPNMNVYNNIAYGMKLRKYSKAEIEKKVMEISEFLHISHILDRKPTTLSGGEQQR 137
           Q+YALFP+MN+ +N+AYG+ ++   K+    +  ++ + + +S +  R+P  LSGG++QR
Sbjct: 87  QDYALFPHMNIRDNVAYGLMVQGVDKSARHARAEQMLDLVRLSGVGARRPGQLSGGQRQR 146

Query: 138 VAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGELVPV--IHITHDFVEAKTLG 195
           VA+ARAL+  P++LLLDEP  ALD  ++E + +ELK +   + +  + ITHD  EA ++ 
Sbjct: 147 VALARALINQPQVLLLDEPLGALDLKLREQMQTELKALQRQLGITFLFITHDQHEALSMS 206

Query: 196 NQIAILINGELNDFG-NQGIFKTPKNEKIANFLGYNIISNNEETFAVAPEEIVVKK---- 250
           ++I +  NG L   G  Q I+  P    +A F+G   + +      +A  + V+ +    
Sbjct: 207 DRIGVFSNGRLEQVGAPQAIYNQPATRFVAEFVGAANVFDGARAREIAGVDSVMLRPERI 266

Query: 251 SLNDENDENIMGTVESLVDFGYYKKLTVNIGDTAVKTITDGE-NP--VNIGDTVSIMYQ 306
            L   +   + G V     FG + ++ V+ G  AV      E NP     GDTV + +Q
Sbjct: 267 RLGASSQARLSGAVIDAQYFGSFSRVRVDWGGEAVSVDLSPELNPELPTPGDTVHLHWQ 325