Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 548 a.a., molecular chaperone GroEL from Pseudomonas simiae WCS417

 Score =  118 bits (296), Expect = 5e-31
 Identities = 140/579 (24%), Positives = 247/579 (42%), Gaps = 94/579 (16%)

Query: 19  DAQRMNILAG-RIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVE----HP 73
           D+ R  +L G  I+A+ V++TLGPKG + ++    G   +T DGV++ +E+ +E    + 
Sbjct: 10  DSARKKMLTGVNILADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEIELEDRFENM 69

Query: 74  AAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQE 133
            A+++ +VA     + GDGTTTA V+A  ++ +  + +   ++P  + +G   A      
Sbjct: 70  GAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGYKAVAAGMNPMDLKRGIDKATIAIVA 129

Query: 134 LLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLI 193
            LK ++      D + + ++   S     +      + +II EA+  V    GK  + +I
Sbjct: 130 ELKNLSKPCA--DTKAIAQVGTISANSDSS------IGDIIAEAMEKV----GK--EGVI 175

Query: 194 KIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRIT 253
            +E+ +G   ++  +++G+  D+  +S     K       L N  I + + +        
Sbjct: 176 TVEEGTGLE-NELSVVEGMQFDRGYLSPYFVNKPETMVAELDNPLILLVDKK-------- 226

Query: 254 DPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLA---KEGIVAARRVK 310
                   I    +ML  + A  KA G  +L   + ++  A   L      GIV    VK
Sbjct: 227 --------ISNIREMLPVLEAVAKA-GRPLLIVSEDVEGEALATLVVNNMRGIVKVAAVK 277

Query: 311 --------KSDMEKLAKATGANVITNIKDLSAQD--LGDAGLVEERKISGDSMIFVE--- 357
                   K+ ++ +A  TG  VI+    LS +   L + G  +   IS ++ I V+   
Sbjct: 278 APGFGDRRKAMLQDIAVLTGGTVISEEIGLSLESATLENLGSAKRVTISKENTIIVDGAG 337

Query: 358 ---------------------------------ECKHPKAVTMLIRGTTEHVIEEVARAV 384
                                            +     AV  +  G+   + E+ AR V
Sbjct: 338 VEQDIQARITQIRAQVAETSSDYDREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKAR-V 396

Query: 385 DDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTL 444
           +DA+      +E+G +V GGG   +     L   A G +  + + +     A+E   R +
Sbjct: 397 EDALHATRAAVEEG-VVPGGGVALIRALEALTNLA-GDNADQNVGIAVLRRAVEAPLRQI 454

Query: 445 AENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAE 504
           A N+G +   ++ +V+     NG    G N  TG   DM E G+++P +V   A+Q+AA 
Sbjct: 455 AANSGDEPSVVVNEVK-----NGKGNYGYNAATGVYGDMIEMGILDPTKVTRSALQAAAS 509

Query: 505 STEMLLRIDDVIAAEKLRGAPDMGDMGGMPGMGGMPGMM 543
              ++L  +  IA +        G M  M GMGGM GMM
Sbjct: 510 IGGLILTTEAAIADKPKAEGSAGGGMPDMGGMGGMGGMM 548