Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 547 a.a., Chaperonin Cpn60/TCP-1 from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  122 bits (307), Expect = 3e-32
 Identities = 133/573 (23%), Positives = 254/573 (44%), Gaps = 88/573 (15%)

Query: 19  DAQRMNILAG-RIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EHP 73
           D+ R  +LAG  ++A+ V++TLGPKG + ++    G  ++T DGV++ +E+ +    E+ 
Sbjct: 10  DSGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEIELKDRFENM 69

Query: 74  AAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQE 133
            A+++ +VA     + GDGTTTA V+A  ++ +  + +   ++P  + +G   A      
Sbjct: 70  GAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATI---- 125

Query: 134 LLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLI 193
               I  E+    K      A+  + G  +  +   + +II EA+  V  D       +I
Sbjct: 126 ---AIVAELKKLSKPCTDTKAIAQV-GTISANSDHSIGDIIAEAMEKVTKD------GVI 175

Query: 194 KIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRIT 253
            +E+ SG   ++  +++G+  D+  +S     K  D  +A L+  + +   +  + IR  
Sbjct: 176 TVEEGSGLE-NELSVVEGMQFDRGYLSPYFINK-PDTMVAELDSPLLLLVDKKISNIREM 233

Query: 254 DPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVK--- 310
            P  ++E + +  + L  +  +++      L                 GIV    VK   
Sbjct: 234 LP--VLEAVAKAGRPLLIVAEDVEGEALATLVVNN-----------MRGIVKVAAVKAPG 280

Query: 311 -----KSDMEKLAKATGANVIT-----NIKDLSAQDLGDAGLV----------------- 343
                K+ ++ +A  TG  VI+     +++  + + LG+A  V                 
Sbjct: 281 FGDRRKAMLQDIAVLTGGTVISEEIGLSLETTTLEHLGNAKRVILNKENTTIIDGAGVKT 340

Query: 344 -------EERKISGDSMIFVEECKHPKAVTMLIRGT--------TEHVIEEVARAVDDAV 388
                  + R+  GD+    ++ K  + +  L  G         +E  ++E    V+DA+
Sbjct: 341 DIDSRISQIRQQIGDTSSDYDKEKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDAL 400

Query: 389 GVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENA 448
                 +E+G +V GGG   V  S++  E  +G +  + + +     A+E   R +  N+
Sbjct: 401 HATRAAVEEG-VVPGGGVALVR-SLQAIEGLKGDNADQDVGIALLRRAVEAPLRQIVANS 458

Query: 449 GLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEM 508
           G +   ++ KV+      G+   G N  +G   DM E G+++P +V   A+Q+A+    +
Sbjct: 459 GDEPSVVVDKVK-----QGSGNYGYNAASGEYGDMIEMGILDPAKVTRSALQAASSIASL 513

Query: 509 LLRIDDVIA--AEKLRGAPDMGDMGGMPGMGGM 539
           ++  + +IA   E       M DMGGM GMGGM
Sbjct: 514 MITTEAMIADVPEDKPAGGGMPDMGGMGGMGGM 546