Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 547 a.a., Heat shock protein 60 kDa family chaperone GroEL from Sphingobium sp. HT1-2

 Score =  118 bits (295), Expect = 7e-31
 Identities = 137/562 (24%), Positives = 234/562 (41%), Gaps = 66/562 (11%)

Query: 18  RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EHP 73
           RDA+   +    I+A+ V+ TLGPKG + ++    G   +T DGV++ +E+ +    E+ 
Sbjct: 10  RDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELKDKFENM 69

Query: 74  AAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQE 133
            A+M+ EVA       GDGTTTA V+A  ++R+  + +   ++P  + +G   A  K  E
Sbjct: 70  GAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGIDLAVAKVVE 129

Query: 134 LLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLI 193
            +++ +  V         ++A   I     +K   ++ E I EA+  V    GK  + +I
Sbjct: 130 DIQSRSKPVAGS-----AEVAQVGIISANGDK---EVGEKIAEAMEKV----GK--EGVI 175

Query: 194 KIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRIT 253
            +E+  G    + ++++G+  D+  +S           + L +  I I E +      + 
Sbjct: 176 TVEEAKGLDF-ELDVVEGMQFDRGYLSPYFITNPEKMAVELADPYILIHEKKLS---NLQ 231

Query: 254 DPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 313
               ++E + Q  + L  +  +I+      L   K    L    +   G    R+    D
Sbjct: 232 SILPILEAVVQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLED 291

Query: 314 MEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVE---ECKHPKAVTMLIR 370
           +  L K    +    IK L    LG  G  +   I  D+   V+   +    K  T  IR
Sbjct: 292 IAVLTKGEVISEDLGIK-LENVTLGMLGTAKRVTIDKDNTTIVDGAGDADSIKGRTEQIR 350

Query: 371 --------------------------------GTTEHVIEEVARAVDDAVGVVGCTIEDG 398
                                           G TE  ++E    VDDA+      +E+G
Sbjct: 351 AQIEVTTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEG 410

Query: 399 RIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVK 458
            IV GGG T +  + K+ E   G +  +   +     +L  + R +A NAG D   +  K
Sbjct: 411 -IVPGGG-TALLYATKVLEGVAGANDDQTRGIDIVRKSLTALVRQIAANAGHDGAVVSGK 468

Query: 459 VRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 518
           +        +   G N  T   E++   GV++P +V   A+Q+AA    +L+  +  + +
Sbjct: 469 L----LDQTDTSFGFNASTDTYENLVAAGVIDPTKVVRTALQNAASVAGLLITTEAAV-S 523

Query: 519 EKLRGAPDMGDM-GGMPGMGGM 539
           E     P M  M GGM GMGGM
Sbjct: 524 ELPEDKPAMPAMPGGMGGMGGM 545