Pairwise Alignments

Query, 446 a.a., prephenate dehydrogenase from Methanococcus maripaludis S2

Subject, 736 a.a., 3-phosphoshikimate 1-carboxyvinyltransferase from Pseudomonas simiae WCS417

 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 33/278 (11%)

Query: 4   GKIMIISI--IGGTDGLGKWFASFLKNRGYDVLVSGRDVI-KGKEVEKELGVTYTNNNID 60
           G++++I +  IGG+      FA  L+  G    V G D+  + +++  ELGV       D
Sbjct: 3   GRLVVIGLGLIGGS------FAKGLRESGLCSEVVGVDLDPQSRKLAVELGVV-DRCEAD 55

Query: 61  ---AAEKGDIVIISVPINVTESVIKEVAPHVKKGSLLMDITSIKERPAK-LMAEFSKTGV 116
              A +  D++ ++VPI   E ++  +A      ++L D+ S K    +     F     
Sbjct: 56  LALACQGADVIQLAVPILAMEKLLGVLAGMDLGQAILTDVGSAKGNVVRAAQRAFGGMPA 115

Query: 117 FVLPTHPMFGPETPSL--------NRQVVILTPTEKEKTNPFFEKIKEFLEIE-GAKVIV 167
             +P HP+ G E   +         R  VILTP   E+T+P    + + L  E GA V  
Sbjct: 116 RFVPGHPIAGSEQSGVEASNAQLFRRHKVILTPL--EQTDPAALAVVDRLWRELGADVEH 173

Query: 168 VSPKEHDKIMGVVQGLTHFVYISLGSTLKDLGIDIKESRNFASPIYELMINIIARIIGQN 227
           +  + HD+++     L H +   L  +L     ++   R  A    +       RI G +
Sbjct: 174 MQVERHDEVLAATSHLPHLLAFGLVDSLAKRNENLDIFRYAAGGFRD-----FTRIAGSD 228

Query: 228 PYLYADIQMHNPQ--IKTIHETFIKNCENISEIVQNKD 263
           P ++ DI + N +  ++T+ +TF  + + + + V   D
Sbjct: 229 PVMWHDIFLANREAVLRTL-DTFRSDLDALRDAVDAGD 265