Pairwise Alignments

Query, 373 a.a., alanine racemase from Methanococcus maripaludis S2

Subject, 818 a.a., bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  213 bits (541), Expect = 2e-59
 Identities = 134/371 (36%), Positives = 201/371 (54%), Gaps = 14/371 (3%)

Query: 4   HPIWAEIDLSAIKNNIKEIRRITNPKSQVMAVVKANAYGHGSVEVSKICLENGADRLAVA 63
           H    E++L A+ +N+   R    P +++M +VKA AYG GS EV+ +   +  D LAVA
Sbjct: 456 HGTVLEVNLDALVHNLNYYRSRVAPATKLMVMVKAFAYGSGSFEVANLLQFHRVDYLAVA 515

Query: 64  RSTEALELRDAGITCPILVFGYVTEEEILKMVENDITLTVYSLEIANSIQKIAEKLGKHS 123
              E + LR+ GIT PI+V    +++   K+ + ++   +YS+E         E    + 
Sbjct: 516 YVDEGVALRENGITLPIMVMN-PSQDSFAKLRQYNLEPEIYSVEQLQDFVSSLEPEATY- 573

Query: 124 KIHIKVDTGMSRLGFLPEKSSVETIKKIRELENIEVEGIYTHFADADNS-DKTYTTMQFS 182
           KIH+K+DTGM RLGF+PE       + +     ++V   ++H A AD +    ++ +Q S
Sbjct: 574 KIHLKLDTGMHRLGFVPEDFEA-LFELLHRYPQVQVASTFSHLAGADEAVHNDFSQLQVS 632

Query: 183 KFTSFLHDLEENGIDIPIKHASNSAAIIDHPETHLNMVRPGIILYGLYPSELVHKERINL 242
           +F S    +EE      IKH  NSA I+  PE  L+MVR GI LYG+   E    E+  L
Sbjct: 633 RFRSMAAAVEERLKYKVIKHILNSAGIVRFPEHQLDMVRLGIGLYGV---EATGSEQEAL 689

Query: 243 QPAMSLKVLVTHVKDVPENTKISYGCTFETKKQSKIASLPIGYADGFTRMLRN--GNVLI 300
           +P  +LK  V+ VK + +   + Y            A++ IGYADG+ R   N  G VLI
Sbjct: 690 RPVSTLKTTVSQVKSIKQGETVGYSRKGIASSDRTTATIAIGYADGYDRRFSNGVGQVLI 749

Query: 301 HGLRVPVVGRICMDQCMIDVTSIENVNVGDVVTVFGKDGTEKISIEEFGNKLGTINYELV 360
           +G R P++G +CMD CM+DVT +  V  GDV  VFG     ++++ E    +GTI YEL+
Sbjct: 750 NGHRCPLIGNVCMDMCMVDVTGVA-VKAGDVAIVFG----PQLTLVELAQSIGTIPYELL 804

Query: 361 CMVSARVPRIY 371
             VS RV R++
Sbjct: 805 TNVSTRVKRVF 815