Pairwise Alignments

Query, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

Subject, 476 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  288 bits (738), Expect = 2e-82
 Identities = 180/445 (40%), Positives = 248/445 (55%), Gaps = 24/445 (5%)

Query: 2   DFVSLVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHQDETSEGD 61
           DF S +N+V   +WG  M+ LL G G + T R GF+Q   +    K    K+      G 
Sbjct: 3   DFFSFINSV---LWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSL--KNSIHPQPGG 57

Query: 62  ISHFQALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKYR 121
           ++ FQ+L T+LAA +G+GN+AGVA A   GGPGA+FWMWV AF GMAT +AE  LA  Y+
Sbjct: 58  LTSFQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYK 117

Query: 122 TVDDNGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFGAFAAFGIGNMVQTNSVADAVASN 181
             D NG+  GGP +++ +GL   G+ + +GV FA F   A   I + VQ N+VA A++ +
Sbjct: 118 ERDVNGQFRGGPAWYMARGL---GM-RWMGVLFAVFLLIAYGIIFSGVQANAVARALSFS 173

Query: 182 FGVDPLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYIIPA 241
           F   PL+TG +LA+FT   I  G+  + +     VP MA+ ++L  LVI  MNIG +   
Sbjct: 174 FDFPPLVTGIILAVFTLLAITRGLHGVARLMQGFVPLMAIIWVLTSLVICVMNIGQLPHV 233

Query: 242 FGTIFSSAFNFSAGFGALIG----TAIMWGVKRGVFSNEAGLGSAPIAAAAAKT--DHPG 295
             +IF SAF +    G   G     AI  G +R +FSNEAG+GS P AAAAA +   HP 
Sbjct: 234 IWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSTPNAAAAAASWPPHPA 293

Query: 296 RQALVSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLT--DLTGASLTAASFDALM-PMGG 352
            Q +V M G F+DT+V+CT + +++ +AG     G T   L G  L   +   LM   G 
Sbjct: 294 AQGIVQMIGIFIDTLVICTASAMLILLAG----NGTTYMPLEGIQLIQKAMRVLMGSWGA 349

Query: 353 LIVTIGLVFFAYSTVLGWSYYGEK--CFEYLIGTKGIRLYRIAFVLVAFWGATASLPLVW 410
             VT+ ++ FA+S+++    Y E    F  L   K I   RI        G   SLPL+W
Sbjct: 350 EFVTLVVILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMW 409

Query: 411 NIADTLNGAMAIPNLIGLLLLSGVV 435
            +AD +   MAI NL  +LLLS VV
Sbjct: 410 QLADIIMACMAITNLTAILLLSPVV 434