Pairwise Alignments

Query, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

Subject, 476 a.a., Uncharacterized transporter YaaJ from Escherichia coli ECRC62

 Score =  285 bits (730), Expect = 2e-81
 Identities = 176/443 (39%), Positives = 246/443 (55%), Gaps = 20/443 (4%)

Query: 2   DFVSLVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHQDETSEGD 61
           DF S +N+V   +WG  M+ LL G G + T R GF+Q   +    K    K+      G 
Sbjct: 3   DFFSFINSV---LWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSL--KNSIHPQPGG 57

Query: 62  ISHFQALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKYR 121
           ++ FQ+L T+LAA +G+GN+AGVA A   GGPGA+FWMWV AF GMAT +AE  LA  Y+
Sbjct: 58  LTSFQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYK 117

Query: 122 TVDDNGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFGAFAAFGIGNMVQTNSVADAVASN 181
             D NG+  GGP +++ +GL   G+ + +GV FA F   A   I + VQ N+VA A++ +
Sbjct: 118 ERDVNGQFRGGPAWYMARGL---GM-RWMGVLFAVFLLIAYGIIFSGVQANAVARALSFS 173

Query: 182 FGVDPLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYIIPA 241
           F   PL+TG +LA+F    I  G+  + +     VP MA+ ++L  +VI  +NIG +   
Sbjct: 174 FDFPPLVTGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLTSMVICVINIGQLPHV 233

Query: 242 FGTIFSSAFNFSAGFGALIG----TAIMWGVKRGVFSNEAGLGSAPIAAAAAKT--DHPG 295
             +IF SAF +    G   G     AI  G +R +FSNEAG+GSAP AAAAA +   HP 
Sbjct: 234 IWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSAPNAAAAAASWPPHPA 293

Query: 296 RQALVSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFDALM-PMGGLI 354
            Q +V M G F+DT+V+CT + +++ +AG         L G  L   +   LM   G   
Sbjct: 294 AQGIVQMIGIFIDTLVICTASAMLILLAGNDT--TYMPLEGIQLIQKAMRVLMGSWGAEF 351

Query: 355 VTIGLVFFAYSTVLGWSYYGEK--CFEYLIGTKGIRLYRIAFVLVAFWGATASLPLVWNI 412
           VT+ ++ FA+S+++    Y E    F  L   K I   RI        G   SLPL+W +
Sbjct: 352 VTLVVILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQL 411

Query: 413 ADTLNGAMAIPNLIGLLLLSGVV 435
           AD +   MAI NL  +LLLS VV
Sbjct: 412 ADIIMACMAITNLTAILLLSPVV 434