Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 504 a.a., amidase from Pseudomonas simiae WCS417

 Score =  157 bits (397), Expect = 7e-43
 Identities = 113/409 (27%), Positives = 186/409 (45%), Gaps = 27/409 (6%)

Query: 47  LYGKIVAVKSNINVKGYKISCASKTLEKYVGTYDATVVKKLRSQGALIVGMTNMDEFAGG 106
           L GK VA+K NI++ G  +   +K LE +V ++DATVV +L   GA I+G    + +   
Sbjct: 88  LAGKTVALKDNISLAGVPMMNGAKPLEGHVPSFDATVVTRLLDAGATILGKATCEHYCLS 147

Query: 107 SSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVG 166
               TS   P  NP       GGSSSGSAA VAA   D+A+G D GGSIR P++ CG  G
Sbjct: 148 GGSHTSDPAPVHNPYRHGFASGGSSSGSAALVAAGEVDLAVGGDQGGSIRIPSAFCGTYG 207

Query: 167 FKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGID----RSDSTSLET-PK 221
            KP++G+V   G+  +  + D  GP+T N  D  ++   + G D    R  +  ++T   
Sbjct: 208 MKPTHGLVPYTGIMAIEATIDHAGPITANVRDNALMLEVMAGADGLDPRQAAPQVDTYSD 267

Query: 222 FEKKDISNYKIGVVKEFMDVT--DEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTY 279
           +  + +S  KIGV++E  ++   D ++ + +   I  F  +G ++ ++S     +A   +
Sbjct: 268 YLARGVSGLKIGVLREGFELANQDPRVASSVRNAIARFSQLGAQVEEVSVPEHAIAGALW 327

Query: 280 YLINYVEFFSATRKYDGRRYG-------EFIEEACG--------EEVLRRILIGKHISEQ 324
           + I            +G  +          +++  G           L+  +       +
Sbjct: 328 HPIGCEGLTMQMMHGNGAGFNWKGLYDVGLLDKQAGWRDQADDLSASLKLCMFVGQYGVE 387

Query: 325 EFSGKYYKKALQARKSMKKEMLGLFNSADLIVGPTVPKLPHKLGEDVSPMEMYAYDVLTV 384
            ++G++Y KA   R+  +          DL+V PTVP +     E    +  Y    L +
Sbjct: 388 RYNGRFYAKAQNLRRLARSAYDAALARYDLLVMPTVPIIAQPHPEPDCSITEYVARALEM 447

Query: 385 PTN-----ICGICSGVVRCGNISGVPVGLQIQGAPLEDEKVLSAMIEFE 428
             N     I G  +  + CG + G+PVGL + G    +  +  A   FE
Sbjct: 448 IGNASAQDITGHPAMSIPCGLVDGLPVGLMLVGKHYAEGTIYQAAAAFE 496