Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 467 a.a., amidase from Pseudomonas simiae WCS417

 Score =  116 bits (291), Expect = 1e-30
 Identities = 116/447 (25%), Positives = 189/447 (42%), Gaps = 35/447 (7%)

Query: 4   DRVSDYLEKIEKSD--VNAFIDVNGEKVLKEAEELEKNDTLKNKP---LYGKIVAVKSNI 58
           D   D L +IE+ +  VNA+  V+ E  L  A   E+   L  +P   L G   ++K   
Sbjct: 25  DVTEDALLRIERYNPVVNAYCHVDPEGALNAARASEQR-WLNGQPCGALDGVPASIKDLT 83

Query: 59  NVKGYKISCASKTLE-KYVGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPT 117
              G      S+T   +     DA     +R  GA+++G T   EF      +   YG T
Sbjct: 84  LTVGMPTRKGSRTTSAEGPWDVDAPFTAFMRKAGAVLLGKTTTPEFGWKGVTDNPLYGIT 143

Query: 118 KNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQ 177
           +NP       GGSS G+ AA A +L  +  GSD GGSIR P +  G  G KP++G V + 
Sbjct: 144 RNPWDTRTTAGGSSGGAGAAAALNLGVLHQGSDAGGSIRIPCAFTGTFGIKPTFGYVPQW 203

Query: 178 GLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSD-------STSLETPKFEKKDISNY 230
               + +    +GP+T+  ED++++   I   D  D       +T   TP     D++  
Sbjct: 204 PASAMTL-LSHLGPMTRKVEDSVLMLQTIAQPDARDGLIGAPRTTPWLTP---GTDLNGL 259

Query: 231 KIGVVKEFMDV-TDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFFS 289
           ++     F  V  D ++   + + +     +G  +  +   + D       L  +   ++
Sbjct: 260 RVAYSPNFGYVDVDPQVAKVVAQAVAGLVQLGAHVEQIDPGFSD------PLEVFSTLWA 313

Query: 290 ATRKYDGRRYGEFIEEACGEEVLRRILIGKHISEQEFSGKYYKKALQARKSMKKEMLGLF 349
           A      R   +  ++     +LR    G+ +S  +F+      AL+AR ++   M    
Sbjct: 314 AGAARLTRPMNDAQKQLLDPGLLRIAQRGERLSLDDFNA-----ALEARAALVARMAAFH 368

Query: 350 NSADLIVGPTVPKLPHKLGEDVSP----MEMYAYDVLTVPTNICGICSGVVRCG-NISGV 404
              D++V P +P      G DV P     E   +   T P N+    +  V CG   +G+
Sbjct: 369 EHYDVLVSPMMPITAFDAGHDVPPGSGLQEWTQWTPFTYPFNLTQQPAASVPCGLATNGL 428

Query: 405 PVGLQIQGAPLEDEKVLSAMIEFEKNY 431
           PVGL + GA   DE+VL     + K +
Sbjct: 429 PVGLHVVGARFADEQVLRVCHAYAKAF 455