Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 449 a.a., Putative amidase R03093 from Variovorax sp. SCN45

 Score =  127 bits (319), Expect = 7e-34
 Identities = 111/397 (27%), Positives = 173/397 (43%), Gaps = 39/397 (9%)

Query: 47  LYGKIVAVKSNINVKGYKISCASKTLE-KYVGTYDATVVKKLRSQGALIVGMTNMDEFAG 105
           L G  V+VK   ++ G      S     +    +DA  V +LR+QGA IVG TNM EFA 
Sbjct: 69  LAGLPVSVKDLYDIAGETTMTGSAVCAGEPAAAHDAAAVARLRTQGAAIVGKTNMTEFAF 128

Query: 106 GSSGETSCYGPTKNPAAMD--RIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCG 163
              G    YG  +NPA     RIPGGSSSG+A +VA  L    +GSDTGGSIR PA+ CG
Sbjct: 129 SGVGINPHYGTPRNPADAQTPRIPGGSSSGAAVSVALGLAVAGLGSDTGGSIRIPAALCG 188

Query: 164 IVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETP-KF 222
           IVGFK +   V R G  +LA S D +  + ++ ED L           +D+   + P   
Sbjct: 189 IVGFKSTQSRVPRTGAFELARSLDTVCAMARSVEDCLT----------ADAAIADAPLAV 238

Query: 223 EKKDISNYKIGVVKEFM-DVTDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYL 281
            ++ +   ++ V +  M D  +  +    E+ ++     G ++VD++       L     
Sbjct: 239 RRRPLQGMRLAVPRTLMFDDIEPAVAAAFERALQALSKAGAQVVDITL----AELAEIAT 294

Query: 282 INYVEFFSATRKYDGRRYGEFIEEACG--EEVLRRILIGKHISEQEFSGKYYKKALQARK 339
           +N    FS        R   F  +  G    V  RI +G  +   ++          A +
Sbjct: 295 VNAPGGFSPVEAAAVHR-ERFAAKRDGFDARVAARIALGTEVRAADYI---------AMQ 344

Query: 340 SMKKEMLGLFNSA----DLIVGPTVPKLPHKLGEDVSPMEMYAYDVL----TVPTNICGI 391
             +++ +G    A    D +V PTVP +   +         +  + L    T   N+   
Sbjct: 345 DRRRDWIGRVEHAIEGFDALVCPTVPIVAPPIAALAEDAAFFKANGLLLRNTFAINLLDG 404

Query: 392 CSGVVRCGNISGVPVGLQIQGAPLEDEKVLSAMIEFE 428
           C+  + C     +PVGL +     +D ++ +  +  E
Sbjct: 405 CAFSLPCHATGELPVGLMLASVRGDDARLAAVALAVE 441