Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 498 a.a., Putative amidase R03093 from Variovorax sp. SCN45

 Score =  112 bits (281), Expect = 2e-29
 Identities = 103/355 (29%), Positives = 156/355 (43%), Gaps = 32/355 (9%)

Query: 80  DATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKN--PAAMDRIPGGSSSGSAAA 137
           DA VV++LR  GA+I+G +N  EFA    G    YG  KN    A  RIPGGS+SG A +
Sbjct: 147 DAIVVERLRRAGAIIIGRSNTVEFAYTGLGINPHYGTPKNVFDRATGRIPGGSTSGGAIS 206

Query: 138 VAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAE 197
           VA  +   AIG+DTGGS+R P++  G+VGFKP+   +   G+  L+ SFD  GP+    E
Sbjct: 207 VADGMAAGAIGTDTGGSLRIPSALNGLVGFKPTQRRIPLDGVLPLSTSFDSAGPIAWTVE 266

Query: 198 DALVLTNAIKGIDRSDSTSLETPK-FEKKDISNYKIGVVKE-FMDVTDEKIRNEIEKGIE 255
           D  +L   + G         E P+      +   +  V K  F D     + +     + 
Sbjct: 267 DCALLDAVMAG---------ELPRPIRVPPLRGLRFAVPKTFFQDDLSPAVASAFAAALS 317

Query: 256 VFKDMGCKIVDLSYKYIDLALPTYYLINYVEFFSATRKYDGRRYGEFIEEACGE---EVL 312
                G  + +L       A PT   IN     +A   +   R  EFI+    +    VL
Sbjct: 318 KLSAAGATVTELPMAEFAKA-PT---INPRGMITAAEAFTWHR--EFIKTGAAKYDPRVL 371

Query: 313 RRILIGKHISEQEFSGKYYKKALQARKSMKKEMLGLFNSADLIVGPTVPKLPHKLGEDVS 372
            RI  G+ I+  +     Y +    R+   + +     S D ++ PT P     + E + 
Sbjct: 372 ARIKTGETITAPD-----YLQLQALRRQFIRSINTAAASYDAMLMPTTPDTAPPIAEVLK 426

Query: 373 PMEMYAY---DVLTVPT--NICGICSGVVRCGNISGVPVGLQIQGAPLEDEKVLS 422
             + Y      +L  P+  N+   C+  V C      P+GL + G    D ++L+
Sbjct: 427 DDDTYYRINGRMLRNPSVVNLFDGCALSVPCHEAGSAPIGLMVAGIGNTDHRLLA 481