Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 458 a.a., putative amidase from Variovorax sp. SCN45

 Score =  147 bits (372), Expect = 5e-40
 Identities = 122/436 (27%), Positives = 199/436 (45%), Gaps = 28/436 (6%)

Query: 4   DRVSDYLEKIE-KSDVNAFIDVNGEKVLKEAEELEKNDTLKNK--PLYGKIVAVKSNINV 60
           + V   L +IE + ++NAFI V GE+ L  A   E          PL+G   +VK     
Sbjct: 24  EAVQAALSRIEARRELNAFITVTGEQALDAARRAEAAVMAGEALGPLHGVPYSVKDLTLT 83

Query: 61  KGYKISCASKTLEKYVGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNP 120
            G + +  S   E +V   DA  V + ++ GA+++G T   EF          +G T NP
Sbjct: 84  AGVRTTMGSAIYEDFVPEEDAVAVARAKAAGAILIGKTTTPEFGHKQVATAPIFGRTLNP 143

Query: 121 AAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLC 180
                 PG SSSG+A AVAA L  +A+G+D GGSIR PAS CGIVG K + GVV      
Sbjct: 144 IDARYTPGASSSGAAVAVAAGLGSLALGTDGGGSIRIPASCCGIVGLKATLGVVPNLQAP 203

Query: 181 DLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETP---KFEKKDISNYKIGVVKE 237
           DL  +    GP+ ++  D  +L +AIKG D  D   L  P   +     +   ++  +  
Sbjct: 204 DLYSANSFTGPMARDVADTQLLFDAIKGFDARDPYGLCGPMPRRARPASLRGLRVAWLPT 263

Query: 238 FMDVTDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFFSATRKYDGR 297
             +  D ++       ++  +  G  +  +   ++  +L  ++L+      +A    +  
Sbjct: 264 AGNPVDPEVEAVTTAAVKAMEREGAVVETVMLDFV--SLERHFLVVLQSMLAARVGANLE 321

Query: 298 RYGEFIEEACGEEVLRRILIGKHISEQEFSGKYYKKALQARKSMKKEMLGLFNSADLIVG 357
           R+G+ ++           LI      ++ S     +A  A+     E+  LF   D++V 
Sbjct: 322 RFGDRLDAT---------LIDAVRKGRQHSAVDLHEATFAKTRCFTELQALFGRFDVLVS 372

Query: 358 PTVPKLPHKLGEDVS-PMEM---------YAYDVLTVPTNICGICSGVVRCG-NISGVPV 406
           PTV   P  +  DVS  +E+          A+   T P N+ G  +  + CG + +G+P+
Sbjct: 373 PTVSAPPLPIDMDVSGEVEIGGKPAGTIRGAWYPYTYPMNLTGHPALSMPCGKSTNGLPI 432

Query: 407 GLQIQGAPLEDEKVLS 422
           GLQ+ G   +D+ +L+
Sbjct: 433 GLQLAGRWYDDDYLLA 448