Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 480 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  123 bits (308), Expect = 1e-32
 Identities = 104/400 (26%), Positives = 177/400 (44%), Gaps = 25/400 (6%)

Query: 45  KPLYGKIVAVKSNINVKGYKISCASKTLEKYVGTYDATVVKKLRSQGALIVGMTNMDEFA 104
           +PL G  +A K NI+V G   +  S  +  +V    A V ++L   GAL++G TN+ E++
Sbjct: 72  QPLRGVPLAFKDNIDVAGMPTTAGSPWMADHVPRRHAGVTQRLVDAGALVLGKTNLHEWS 131

Query: 105 GGSSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGI 164
            G +G    +GP++NP    R+ GGSS G+AA +      +AIG+DTGGS+R PA+ CG+
Sbjct: 132 QGVTGHNHGFGPSRNPFDSTRVTGGSSGGNAALLGLRAAPVAIGTDTGGSVRVPAALCGL 191

Query: 165 VGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETPKFEK 224
           VG++P+       GL  ++ +FD  G + +  +D +++ +A+ G            +   
Sbjct: 192 VGYRPTVHRWPDDGLVPISPTFDTAGVMARCVDDCVLVDHAVAG---------GPLRLAA 242

Query: 225 KDISNYKIGVVKE-FMDVTDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYL-I 282
             +   ++GV +  F +  D  +     + +   +  G  +V               + I
Sbjct: 243 MPLMGVRLGVPEAYFWEELDPPVAELARESLHALQTAGAVLVPCDLAEAGALFQKGSMSI 302

Query: 283 NYVEFFSATRKYDGRRYGEFIEEACGEEVLR---RILIGKHISEQEFSGKYYKKALQA-R 338
           +  E   A   Y  R    F   A  + V     R L  +   +   + + Y  AL   R
Sbjct: 303 SLHEILPALAAYFARHERPFDARALTDAVASPDVRPLFERLFGDSAITPEAYAHALHVLR 362

Query: 339 KSMKKEMLGLFNSADL--IVGPTVPKLPHKLGEDVS------PMEMY-AYDVLTVPTNIC 389
             M+      F   D+  +V PT P    ++GEDV       P   + AY   T P  + 
Sbjct: 363 PRMQAAYRDCFARHDIAALVFPTSPLTAARIGEDVQVTLCGRPTSAFSAYIRNTGPAGMA 422

Query: 390 GICSGVVRCG-NISGVPVGLQIQGAPLEDEKVLSAMIEFE 428
           G+ +  +  G     +P GL++ G    D  +L+  +  E
Sbjct: 423 GLPAVSLPIGLTRDRLPAGLELTGPEGADSMLLALALGVE 462