Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 446 a.a., Amidase from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  139 bits (350), Expect = 2e-37
 Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 17/400 (4%)

Query: 37  EKNDTLKNKPLYGKIVAVKSNINVKGYKISCASKTLEKYVGTYDATVVKKLRSQGALIVG 96
           E +   K   L+G  V+ K NI V+G  ++  ++ +  ++   DA +V +L++ GA++ G
Sbjct: 53  EADQARKGTSLWGVPVSFKDNICVRGLPLTAGTRGMSGFIADQDAAIVSQLKALGAVVAG 112

Query: 97  MTNMDEFAGGSSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIR 156
             NM E + G +     +G   NP A     GGSS GSAAAVA+ +  +++G+DTGGSIR
Sbjct: 113 KNNMHELSFGVTSINPHWGAVGNPVAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIR 172

Query: 157 NPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTS 216
            PA+ CGI GF+P+ G +S  G+  ++ + D +G LT+ A DA  +   + G  +S   S
Sbjct: 173 IPAAFCGITGFRPTTGRLSTAGIIPVSHTKDCVGLLTRTAGDAEFVYGLLSGKQQSFPLS 232

Query: 217 LETPKFEKKDISNYKIGVVKEFMDVTDEKIRNEIEKGIEVFKDMGCKIVDL-SYKYIDLA 275
              P          +IG+        D ++       + + +  G + V++     ++L 
Sbjct: 233 RTGP---------CRIGLPVSMWSDLDGEVERACVNALSLLRKTGFEFVEIDDADIVELN 283

Query: 276 LPTYYLINYVEF---FSATRKYDGRRYGEFIEEACGEEVLRRILIGKHISEQEFSGKYYK 332
               + +   EF   F+ +    G ++G     A  ++   + +I  H+ E      +Y 
Sbjct: 284 QTLTFTVPLYEFFADFAQSLLSLGWKHGIHHIFAQVDDANVKGIINHHLGEGAIKPAHYL 343

Query: 333 KALQARKSMKKEMLGLF--NSADLIVGPTVP-KLPHKLGEDVSPMEMYAYDVLTVPTNIC 389
            +LQ  + +K++M  LF  +   L+  PTVP ++PH    D       A     + +N  
Sbjct: 344 SSLQNGELLKRKMDELFARHHIKLLGYPTVPCRVPHLDHADRPEFFSQAIRNTDLASNAM 403

Query: 390 GICSGVVRCGNISGVPVGLQIQGAPLEDEKVLSAMIEFEK 429
            + S  +  G    +PVGL        D  +LS +   EK
Sbjct: 404 -LPSITIPVGPEGRLPVGLSFDAPRARDAFLLSNVSLIEK 442