Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 453 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  142 bits (357), Expect = 3e-38
 Identities = 127/442 (28%), Positives = 198/442 (44%), Gaps = 45/442 (10%)

Query: 10  LEKIEKSDVNA-FIDVNGEKVLKEAEELEKN--DTLKNKPLYGKIVAVKSNINVKGYKIS 66
           L+ I K D  A F+ V   + + EAE   K   +      L G  VA K   +++G   +
Sbjct: 30  LDAIGKEDDQAIFVSVTSARAMAEAESASKRIREGRSCGVLDGIPVAWKDLFDLEGMPTT 89

Query: 67  CASKTL-EKYVGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPAAMD- 124
             SK L +    + DA VV  L+  G + +G TNM EFA    G    YG  +NP + D 
Sbjct: 90  AGSKVLSDDAPASRDADVVAALKQAGMVSIGRTNMSEFAFSGLGINPHYGTPRNPVSTDG 149

Query: 125 -RIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLA 183
            R+PGGSSSG+   VAA L  +AIG+DTGGS+R PA+  G+VG+K S G  S  G+  LA
Sbjct: 150 HRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFNGVVGYKASRGRYSMHGVYPLA 209

Query: 184 MSFDQIGPLTKNAEDALVLTNAIKGIDRSD-------STSLETPKFEKKDISNYKIGVVK 236
            S D +GPLT+  +DA+ +  A++G   +D         SL  P  E       + GV  
Sbjct: 210 KSLDSLGPLTRTVQDAVWVDAAMRGRTAADLARMPLSGVSLVVP--ETVVFDGIEPGVAA 267

Query: 237 EFMDVTDEKIR---NEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFFSATRK 293
            F    +  +R   +   +   VF ++            DL      L+    F     +
Sbjct: 268 AFEQAVERLVRAGASVRRQAFPVFSEL-----------FDLIREKGALVTAEAFSLHKAR 316

Query: 294 YDGRRYGEFIEEACGEEVLRRILIGKHISEQEFSGKYYKKALQARKSMKKEMLGLFNSAD 353
            +G              V+ R  +G +IS  +     Y   ++AR  M      + +  +
Sbjct: 317 LEGADAARM-----DPRVVVRTRLGANISMPD-----YIAIIEARDRMMAAFSAMISRDE 366

Query: 354 LIVGPTVPKLPHKLGEDVSPME-MYAYDVLTVPT----NICGICSGVVRCG-NISGVPVG 407
           +++ PT+P +  K+   V   +  +A +  T+      N    C   + CG   +G+PVG
Sbjct: 367 ILISPTLPHVAAKVAPLVENDDAFFAMNAKTLRNTQIGNFLDHCGVSIPCGTGEAGMPVG 426

Query: 408 LQIQGAPLEDEKVLSAMIEFEK 429
           L + G    D+++L   +  E+
Sbjct: 427 LLLSGLYGTDDRLLGVAMAAEE 448