Pairwise Alignments

Query, 167 a.a., 4Fe-4S dicluster domain-containing protein from Methanococcus maripaludis S2

Subject, 203 a.a., hydrogenase 3, Fe-S subunit (NCBI) from Escherichia coli BW25113

 Score = 89.4 bits (220), Expect = 3e-23
 Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 43/166 (25%)

Query: 11  CDNCGDCVKSCSEVHEVSGIS------IWEHEGRYLPVVCQHCTSSPCMEVCPVSAIESK 64
           C  C  C  +CSE H   G+       +  +E    P +C HC  +PC  VCPV+AI   
Sbjct: 12  CIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCAVVCPVNAITRV 71

Query: 65  DGVIYLDKESCIGCGLCAMACPFGAIYISGK----------------------------- 95
           DG + L++  C+ C LC +ACPFGAI  SG                              
Sbjct: 72  DGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARVSTLLD 131

Query: 96  -------TAHKCDLC-FGRDEQACVKACSKRCLEVVNVDELVMDKK 133
                   A KCDLC F     ACV+ C  + L +V+  ++    K
Sbjct: 132 WVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSK 177



 Score = 23.5 bits (49), Expect = 0.002
 Identities = 8/18 (44%), Positives = 9/18 (50%)

Query: 68 IYLDKESCIGCGLCAMAC 85
          +  D   CIGC  C  AC
Sbjct: 5  VIADSTLCIGCHTCEAAC 22