Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 159 a.a., 4Fe-4S dicluster domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 76.3 bits (186), Expect = 2e-19
 Identities = 43/126 (34%), Positives = 55/126 (43%), Gaps = 20/126 (15%)

Query: 10  CVDCKKCERACPI----------NAIHVFD------GIPIRCMHCEDAPCLNVCPEDAI- 52
           C  C++CE AC            + I VFD       +P  C  C  A CL  CP DAI 
Sbjct: 12  CTGCRQCEMACSFEKERSFNPSKSRIRVFDIHSEARFVPYTCTQCAQAWCLQACPVDAIG 71

Query: 53  -EKIADKVVVHPEKCVGCALCAEVCPVGAIQIDRGTKVAVKCDGCIERGSEVCLEVCPTK 111
            + +    VV+   CVGC +C   CP G I     +    KCD C   G   C + CPT 
Sbjct: 72  IDAVTRAKVVNDNICVGCKVCTIACPFGTINYVADSGKVAKCDLC--GGDPACAKACPTG 129

Query: 112 ALDYYE 117
           A+ Y +
Sbjct: 130 AITYVD 135



 Score = 35.0 bits (79), Expect = 5e-07
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 6   NIDLCVDCKKCERACPINAIHVF--DGIPIRCMHC-EDAPCLNVCPEDAI 52
           N ++CV CK C  ACP   I+     G   +C  C  D  C   CP  AI
Sbjct: 82  NDNICVGCKVCTIACPFGTINYVADSGKVAKCDLCGGDPACAKACPTGAI 131



 Score = 29.6 bits (65), Expect = 2e-05
 Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 46/113 (40%)

Query: 59  VVVHPEKCVGC-------------------------------------------ALCAEV 75
           +++ P KC GC                                           A C + 
Sbjct: 5   LLIQPAKCTGCRQCEMACSFEKERSFNPSKSRIRVFDIHSEARFVPYTCTQCAQAWCLQA 64

Query: 76  CPVGAIQIDRGTKVAVKCDG-CIERGSEVCLEVCPTKALDYYENTIENKRAEL 127
           CPV AI ID  T+  V  D  C+  G +VC   CP   ++Y  ++ +  + +L
Sbjct: 65  CPVDAIGIDAVTRAKVVNDNICV--GCKVCTIACPFGTINYVADSGKVAKCDL 115



 Score = 23.5 bits (49), Expect = 0.001
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 8   DLCVDCKKCERACPINAIHVFD 29
           DLC     C +ACP  AI   D
Sbjct: 114 DLCGGDPACAKACPTGAITYVD 135