Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 185 a.a., Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 47/133 (35%), Positives = 62/133 (46%), Gaps = 25/133 (18%)

Query: 6   NIDLCVDCKKCERACP-INAI-------HVF----DGIP--------IRCMHCEDAPCLN 45
           N D C+ C+ C  AC   N +       +V+    D  P        + C HCE   C+ 
Sbjct: 8   NSDKCIGCRGCAMACKSFNQLEPDRFWRYVYPLDKDIYPHEERAFYSLACNHCEHPACVA 67

Query: 46  VCPEDAIEKIADKVVVH-PEKCVGCALCAEVCPVGAIQIDRGTKVAVKCDGCIER----G 100
            CP +A  K  D VVVH PE+C+GC  C   CP GA + +  T+ A KC  C ER     
Sbjct: 68  ACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEETRKAEKCSMCYERLDIGM 127

Query: 101 SEVCLEVCPTKAL 113
           +  C+  CP  AL
Sbjct: 128 NPACVNACPVGAL 140



 Score = 30.8 bits (68), Expect = 1e-05
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 16/77 (20%)

Query: 3   VMPNIDLCVDCKKCERACPINAIHVFDGI--PIRCMHCED-------APCLNVCPEDAI- 52
           V+ N + C+ CK C R CP  A    +      +C  C +         C+N CP  A+ 
Sbjct: 82  VVHNPERCIGCKNCIRNCPYGAPRFNEETRKAEKCSMCYERLDIGMNPACVNACPVGALS 141

Query: 53  ------EKIADKVVVHP 63
                 + + D  V +P
Sbjct: 142 IIDLDADPVPDNAVQYP 158



 Score = 25.8 bits (55), Expect = 3e-04
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 15/76 (19%)

Query: 60  VVHPEKCVGCALCAEVC-PVGAIQIDRGTKVAVKCD--------------GCIERGSEVC 104
           +V+ +KC+GC  CA  C     ++ DR  +     D               C       C
Sbjct: 6   LVNSDKCIGCRGCAMACKSFNQLEPDRFWRYVYPLDKDIYPHEERAFYSLACNHCEHPAC 65

Query: 105 LEVCPTKALDYYENTI 120
           +  CP +A    E+ +
Sbjct: 66  VAACPVEAYTKREDGV 81