Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., putative oxidoreductase, Fe-S subunit (VIMSS) from Escherichia coli BW25113

 Score = 73.9 bits (180), Expect = 1e-18
 Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 23/127 (18%)

Query: 10  CVDCKKCERACPI--------NA--------IHVFDGI--PIRCMHCEDAPCLNVCPEDA 51
           C+ C+ CE AC +        NA        +   D I  P+ C  CE+APC+  CP  A
Sbjct: 12  CIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGA 71

Query: 52  IEKIADKVVVHPEKCVGCALCAEVCPVGAIQIDR----GTKVAVKCDGCIER-GSEVCLE 106
           +      V  +  +C+GC  C   CP G I I        +  VKCD C +R     C+E
Sbjct: 72  LTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVE 131

Query: 107 VCPTKAL 113
            CPT+AL
Sbjct: 132 SCPTQAL 138



 Score = 32.7 bits (73), Expect = 3e-06
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 12/67 (17%)

Query: 3   VMPNIDLCVDCKKCERACPINAIHVFDGIP-------IRCMHCED----APCLNVCPEDA 51
           V  N   C+ C+ C  ACP   I +   +P       ++C  CE       C+  CP  A
Sbjct: 79  VQTNSARCIGCQSCVSACPFGMITI-QSLPGDTRQQIVKCDLCEQREEGPACVESCPTQA 137

Query: 52  IEKIADK 58
           ++ + ++
Sbjct: 138 LQLLTER 144



 Score = 31.2 bits (69), Expect = 7e-06
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 19/86 (22%)

Query: 59  VVVHPEKCVGCALCAEVCPVG--------------AIQIDRGTKVA--VKCDGCIERGSE 102
           ++V+P  C+GC  C   C V                +++ R   ++  V C  C    + 
Sbjct: 5   IIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQC---ENA 61

Query: 103 VCLEVCPTKALDYYENTIENKRAELV 128
            C+  CP  AL   E  ++   A  +
Sbjct: 62  PCVGACPVGALTMGEQVVQTNSARCI 87