Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 205 a.a., hydrogenase 4 subunit HyfA from Escherichia coli ECRC62

 Score = 72.8 bits (177), Expect = 3e-18
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 27/134 (20%)

Query: 10  CVDCKKCERACPINAIHVFDGI----------------PIRCMHCEDAPCLNVCPEDAIE 53
           C  C  C  AC  + +H   G+                P+ C HCE+APCL VCP +AI 
Sbjct: 12  CTGCNTCLAAC--SDVHKTQGLQQHPRLALAKTSTLTAPVVCHHCEEAPCLQVCPVNAIS 69

Query: 54  KIADKVVVHPEKCVGCALCAEVCPVGAIQ------IDRGTKVAVKCDGCIERGSEVCLEV 107
           +  D + ++   C+GC LCA VCP GAI       ++   +   + +G ++ G E    V
Sbjct: 70  QRDDAIQLNESLCIGCKLCAVVCPFGAISASGSRPVNAPAQYVFQAEGSLKDGEE---NV 126

Query: 108 CPTKALDYYENTIE 121
            P  AL  +E  ++
Sbjct: 127 PPQHALLRWEPGVQ 140



 Score = 33.5 bits (75), Expect = 2e-06
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 24/111 (21%)

Query: 6   NIDLCVDCKKCERACPINAIHVFDGIPIRCMHCEDAPCLNVCPEDAIEKIADKVVVHPEK 65
           N  LC+ CK C   CP  AI      P+      +AP   V   +   K  ++  V P+ 
Sbjct: 78  NESLCIGCKLCAVVCPFGAISASGSRPV------NAPAQYVFQAEGSLKDGEE-NVPPQH 130

Query: 66  CVGCALCAEVCPVGAIQIDRGTK-VAVKCDGC--IERGSEVCLEVCPTKAL 113
            +             ++ + G + VAVKCD C  +  G   C+  CP +AL
Sbjct: 131 AL-------------LRWEPGVQTVAVKCDLCDFLPEG-PACVRACPNQAL 167