Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 157 a.a., putative hydrogenase, 4Fe-4S ferredoxin-type component from Escherichia coli BL21

 Score = 85.5 bits (210), Expect = 3e-22
 Identities = 47/128 (36%), Positives = 61/128 (47%), Gaps = 24/128 (18%)

Query: 10  CVDCKKCERACP-----------------INAIHVFDG----IPIRCMHCEDAPCLNVCP 48
           C+ C+ CE AC                  I+ I V         + C  CEDAPC NVCP
Sbjct: 12  CIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQCEDAPCANVCP 71

Query: 49  EDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQI--DRGTKVAVKCDGCIERGS-EVCL 105
            DAI +    + V   +C+GC  C   CP GA+++   R    A+KCD C  R +   C+
Sbjct: 72  VDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACV 131

Query: 106 EVCPTKAL 113
           E CPTKAL
Sbjct: 132 EACPTKAL 139



 Score = 25.4 bits (54), Expect = 4e-04
 Identities = 17/74 (22%), Positives = 23/74 (31%), Gaps = 22/74 (29%)

Query: 59  VVVHPEKCVGCALCAEVCPVG-------------------AIQIDRGTKVAVKCDGCIER 99
           ++    KC+GC  C   C V                     +  D     AV C  C + 
Sbjct: 5   IIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQCED- 63

Query: 100 GSEVCLEVCPTKAL 113
               C  VCP  A+
Sbjct: 64  --APCANVCPVDAI 75