Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 363 a.a., Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) from Sphingobium sp. HT1-2

 Score =  132 bits (333), Expect = 2e-35
 Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 66/297 (22%)

Query: 220 DAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKSQIVQTEFWNFDTLFEPQDHPAR 279
           D  +P +       H +S+++ E+ E+   +GF       ++ ++ NF  L  P+ HPAR
Sbjct: 93  DMTLPADLGPQGSVHAVSQVMDELAEIFADLGFSVATGPEIEDDWHNFTALNIPETHPAR 152

Query: 280 DMQDTFFVKYPNTGKVPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLRTHT 339
            M DTF+  +P                                   DE   K+ +LRTHT
Sbjct: 153 AMHDTFY--FP-----------------------------------DEEGQKKMLLRTHT 175

Query: 340 TVSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKHLPEFYQCEGIVMAEDVNFDNLV 399
           +   I+ + +     +E P ++    RV+R+++ D  H P F+Q EG+V+ + +   +L 
Sbjct: 176 SPVQIRTMMT-----QEPPIRIIAPGRVYRSDS-DATHTPMFHQIEGLVIDKGITLGHLK 229

Query: 400 GILKEFLRKLGFEK----VRIRPAYFPFTEPSLEAEVYME---------------GKGWL 440
             L+ FL+   FE+    +R+RP+YFPFTEPS+E +V                  G GWL
Sbjct: 230 WTLETFLKAF-FEREDIVLRLRPSYFPFTEPSVEVDVGYTLTNGQRVIGGDGDAPGGGWL 288

Query: 441 ELLGAGVFRPEVLEPFGIKKPV---LAWGIGLSRLAMLRFGLTDIRELHKNDMEWLK 494
           E+LG+G+    V+E  G+        A+G G+ RLAML++G+ D+R     D+ WLK
Sbjct: 289 EVLGSGMVNRRVIEACGLDPDEWQGFAFGTGVDRLAMLKYGMNDLRAFFDGDLRWLK 345