Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 350 a.a., Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  123 bits (308), Expect = 1e-32
 Identities = 97/356 (27%), Positives = 158/356 (44%), Gaps = 65/356 (18%)

Query: 157 KIVENLKKRGFLNLKEVVDRSFEIKDAGTEFIKNPIEIKEEITQLTREMIVSGKWKDYFI 216
           +I E +K  G L+++E   R   I  A     K  IE    +T+  + +  +        
Sbjct: 37  RITELMKGLGTLSVEEKKTRGAAINQA-----KQAIEAA--LTERRQALADAELQAQLKA 89

Query: 217 RPYDAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKSQIVQTEFWNFDTLFEPQDH 276
              D  +P         HP+S  ++ +  +  SMGF+      ++++++NF  L  P+DH
Sbjct: 90  EALDVTLPGRQRGQGGLHPVSLTLERIEAIFGSMGFEVADGPEIESDWFNFTALNTPEDH 149

Query: 277 PARDMQDTFFVKYPNTGKVPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLR 336
           PAR M DTF+V+   + K P                                     +LR
Sbjct: 150 PARSMHDTFYVE-GGSEKAPN------------------------------------LLR 172

Query: 337 THTTVSSIKYL--------ASLSESERENPHKVFCIDRVFRNETIDYKHLPEFYQCEGIV 388
           THT+   I++         A L         +V    R +R ++ D  H P F+QCEG+ 
Sbjct: 173 THTSPMQIRHAVQHVKRHRADLDAGRSMPEIRVIAPGRTYRVDS-DATHSPMFHQCEGLW 231

Query: 389 MAEDVNFDNLVGILKEFLRKLGFEK----VRIRPAYFPFTEPSLEAEVYME----GKGWL 440
           + E+V+F +L  +  +F R   FE     +R RP++FPFTEPS E ++  +       WL
Sbjct: 232 IGENVSFKDLKHVFTDFCRTF-FESDDLVLRFRPSFFPFTEPSAEIDIQFQHGPLAGRWL 290

Query: 441 ELLGAGVFRPEVLEPFGI---KKPVLAWGIGLSRLAMLRFGLTDIRELHKNDMEWL 493
           E+ G+G   P V+   G+   +    A+G+G  RL MLR+G+ D+R     D+ +L
Sbjct: 291 EVAGSGQVHPNVVRNMGLDPERYIGFAFGMGPDRLTMLRYGVNDLRLFFDGDVRFL 346