Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 327 a.a., Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  142 bits (358), Expect = 2e-38
 Identities = 103/361 (28%), Positives = 165/361 (45%), Gaps = 57/361 (15%)

Query: 143 SINPDLSTYSKDEVKIVENLKKRGFLNLKEVVDRSFEIKD---AGTEFIKNPIEIKEEIT 199
           +IN      + D V+ VE L K+G L L+    R    ++   AG        ++++ + 
Sbjct: 14  AINQASDVAALDNVR-VEYLGKKGHLTLQMTTLRDLPPEERPAAGAVINAAKEQVQQALN 72

Query: 200 QLTREMIVSGKWKDYFIRPYDAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKSQI 259
               E+  +           D  +P   I     HP+++ I  +      +GF       
Sbjct: 73  ARKAELESAALNARLAAETIDISLPGRRIENGGLHPVTRTIDRIESFFGELGFTVATGPE 132

Query: 260 VQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTGKVPKELLEKVKGIHECGTIDGEKISK 319
           ++ ++ NFD L  P  HPAR   DTF+                                 
Sbjct: 133 IEDDYHNFDALNIPGHHPARADHDTFW--------------------------------- 159

Query: 320 GWCYKFDENVSKRTVLRTHTTVSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKHLP 379
                FD       +LRT T+   I+ + +     ++ P ++    RV+RN+  D  H P
Sbjct: 160 -----FDAT----RLLRTQTSGVQIRTMKA-----QQPPIRIIAPGRVYRND-YDQTHTP 204

Query: 380 EFYQCEGIVMAEDVNFDNLVGILKEFLRKLGFE--KVRIRPAYFPFTEPSLEAEVYMEGK 437
            F+Q EG+++  +++F NL G L +FLR    E  ++R RP+YFPFTEPS E +V  +  
Sbjct: 205 MFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNG 264

Query: 438 GWLELLGAGVFRPEVLEPFGIKKPV---LAWGIGLSRLAMLRFGLTDIRELHKNDMEWLK 494
            WLE+LG G+  P VL   GI   +    A+G+G+ RL MLR+G+TD+R   +ND+ +LK
Sbjct: 265 KWLEVLGCGMVHPNVLRNVGIDPEIYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLK 324

Query: 495 K 495
           +
Sbjct: 325 Q 325