Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 327 a.a., phenylalanyl-tRNA synthetase alpha subunit (NCBI) from Escherichia coli BW25113

 Score =  144 bits (362), Expect = 6e-39
 Identities = 104/363 (28%), Positives = 167/363 (46%), Gaps = 57/363 (15%)

Query: 141 KVSINPDLSTYSKDEVKIVENLKKRGFLNLKEVVDRSFEIKD---AGTEFIKNPIEIKEE 197
           K +I+      + D V+ VE L K+G L L+    R    ++   AG    +   ++++ 
Sbjct: 12  KAAISQASDVAALDNVR-VEYLGKKGHLTLQMTTLRELPPEERPAAGAVINEAKEQVQQA 70

Query: 198 ITQLTREMIVSGKWKDYFIRPYDAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKS 257
           +     E+  +           D  +P   I     HP+++ I  +      +GF     
Sbjct: 71  LNARKAELESAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFFGELGFTVATG 130

Query: 258 QIVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTGKVPKELLEKVKGIHECGTIDGEKI 317
             ++ ++ NFD L  P  HPAR   DTF+                               
Sbjct: 131 PEIEDDYHNFDALNIPGHHPARADHDTFW------------------------------- 159

Query: 318 SKGWCYKFDENVSKRTVLRTHTTVSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKH 377
                  FD       +LRT T+   I+ + +     ++ P ++    RV+RN+  D  H
Sbjct: 160 -------FDTT----RLLRTQTSGVQIRTMKA-----QQPPIRIIAPGRVYRND-YDQTH 202

Query: 378 LPEFYQCEGIVMAEDVNFDNLVGILKEFLRKLGFE--KVRIRPAYFPFTEPSLEAEVYME 435
            P F+Q EG+++  +++F NL G L +FLR    E  ++R RP+YFPFTEPS E +V  +
Sbjct: 203 TPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGK 262

Query: 436 GKGWLELLGAGVFRPEVLEPFGIKKPV---LAWGIGLSRLAMLRFGLTDIRELHKNDMEW 492
              WLE+LG G+  P VL   GI   V    A+G+G+ RL MLR+G+TD+R   +ND+ +
Sbjct: 263 NGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRF 322

Query: 493 LKK 495
           LK+
Sbjct: 323 LKQ 325