Pairwise Alignments

Query, 332 a.a., TIGR01212 family radical SAM protein from Methanococcus maripaludis S2

Subject, 309 a.a., COG1242: Predicted Fe-S oxidoreductase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  168 bits (425), Expect = 2e-46
 Identities = 95/301 (31%), Positives = 158/301 (52%), Gaps = 11/301 (3%)

Query: 30  ITQYGLYTKREKGYKTFKVAVDAGFSCPNKDGTIDTEGCIFCPKMGRVIS-VEYCNVKYS 88
           +  +G    R  G K  K+ +  GFSCPN+DGTI   GC FC     V S  +     +S
Sbjct: 7   VNMFGGDLLRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFC----NVASFADEAQQHHS 62

Query: 89  LKEQIEHQIRR-NKEKGIEKFYVYFYPGTNTHASPEYLKELWDFALSFDDVLGISIGTRP 147
           + EQ+ HQ    N+ K   ++  YF   T+T A  + L+ ++  A+S   ++G+ +GTRP
Sbjct: 63  IAEQLAHQAHLVNRAK---RYLAYFQAYTSTFAEVQVLRSMYQQAVSQASIVGLCVGTRP 119

Query: 148 DCLEDEKLDILENYVKEGYEIWIDLGIQTMHDKTLDFLNRKHSSDDVRRVLLECKKRGIL 207
           DC+    +D+L  Y  +GYE+W++LG+QT HDKTL  +NR H     +R     ++RG+ 
Sbjct: 120 DCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQRTTRIARERGLK 179

Query: 208 VCGHIILGLPDESWDMMMETAKILSDLEIDALKIYPLVVVENTKLEEIYWKGEYKSLDEK 267
           VC H+I+GLP E     ++T + + +  +D +K++PL +V+ + + + +  G    ++  
Sbjct: 180 VCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKAWEAGRLNGIELD 239

Query: 268 QYIHLVADFLEHISKYVIIQRVSKDKVPEEIKISPEWSLKRLRILNEVSKLLDKRKTKQG 327
            Y     + + H    VI  R+S         ++P W   R   + E+ K L++    QG
Sbjct: 240 DYTLTAGEMIRHTPPEVIYHRISA-SARRPTLLAPLWCENRWTGMVELDKYLNEHGV-QG 297

Query: 328 S 328
           S
Sbjct: 298 S 298