Pairwise Alignments

Query, 447 a.a., S-layer protein from Methanococcus maripaludis S2

Subject, 412 a.a., hypothetical protein from Methanococcus maripaludis S2

 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 30/181 (16%)

Query: 255 PKSLSEN-------FGLLNYKVNLVDVNGEDLTAFFTVTQNLNYEYDMDEGTKYFGNNIF 307
           P+S SEN       F L NY  N V       T   + + +    YD D       N+I 
Sbjct: 220 PESDSENGVVVADIFALANYPENYVIKETPVTTPSPSHSSSGGRSYDSD-----ISNDIE 274

Query: 308 AVKLENDEEDDWDDELYLYKNNKKYDKIVDYQGSVQL---VDQDELLSASSDLILIGGPV 364
           +  ++N          ++      Y   +D Q + +L   +   E    S + +++GGP 
Sbjct: 275 SKVIKN----------FVSSAAVIYGNEIDQQYAEELRERIQNAEGFKISGNSVIVGGPN 324

Query: 365 SNKVTESIQNSLNIEVTNDYPGEGKGVIQTI----TNPNNAES-TILVLAGSDREGTKAC 419
           +N   +   N   + ++NDYPGE KGVIQ +    ++ N  +S TI+ +AGSDR GT+A 
Sbjct: 325 ANGFAKEYNNQFEMPISNDYPGENKGVIQVLKVHGSSINIIQSYTIVYIAGSDRLGTQAA 384

Query: 420 V 420
           +
Sbjct: 385 L 385