Pairwise Alignments

Query, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

 Score =  130 bits (326), Expect = 4e-35
 Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 2/247 (0%)

Query: 18  LKAILILVLGYFAVKIVSSILENGAKKSKIPELVSEFVIKLFSAILYVFVILLAVGVFGV 77
           L A++ L +G++ + +++  +            +  F+  L +  L V +++    + GV
Sbjct: 29  LLAVVTLAIGWWLINVLTHRVGRLLALRNADLALQHFITSLANIALKVMLVVNVASMIGV 88

Query: 78  ETGPIILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQIGGITGKIVEVGI 137
            T   +  + A+  L +G  LQ +L N   G+ I + +P    + ++  G +G +  + I
Sbjct: 89  ATTSFVAAIGAAT-LAIGLALQGSLANFAGGVLILLFRPFRIGDWIEAQGTSGTVDSIQI 147

Query: 138 MATKLLTPDNVVITIPNKLVWGSPITNYTRMDLRRVDVAVGVSYGENLDNALSKALELIS 197
             T L T DN  + IPN  +    ITN  R   R+V   VGV Y  +L  A    LEL  
Sbjct: 148 FHTVLRTGDNKTVIIPNGSLSNGLITNTNRQPTRKVVFDVGVDYEADLQKAREVLLELAK 207

Query: 198 EHPKVLKDPAPAVVVTGLGESSVDLQLRAWTKTGDYWGVKGDLTKGIYEKYGKEGIEIPF 257
           + P+VL DPA   VV+ LG+SS+ + LR WTKT DYW V   L +   ++    GI+IPF
Sbjct: 208 D-PRVLADPAAVAVVSTLGDSSITVSLRCWTKTADYWDVVFMLNELARDRLKAAGIDIPF 266

Query: 258 PQMDIHV 264
           PQ  I V
Sbjct: 267 PQRVIRV 273